Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1117 ATGTATTCTGATCGGGTGGAGACTGGGGCGAGGAGGTCAGTAAAGGAACGTCTTAATGGCAATTTTGTCAGCGACTCTACCCGCCCACGGCAAATCACCGGAAAGAGGCAGAGACAAGATGACAAATGGGAGCATGATCTTTTTGAGGATGATGAACCACGAGTTTCTAAACGCCAAGTTGGTGGTCAAGATCTTCGCCTGAAGCTTCAGAAAAAGGGTTTTCAATCAGCTATTCAGAGTGGCAAGAATTCTGTTCCAGGTATGCGTGATCTACGTGAAAAGTTATCAGGGACAATGACTCAACAGCCTAAAAACTCTGATCCACCAAAGTCGAAAGTGGAAGTTGTTAAATCAAGCAGTAAAAGTGTCATTGTTGAGGCTTCTGCGCCACATGTTAAAAAAGCAACTGACCCAGCTCCCAAAAAGAAGACATCACAAAAGACTGGTGGTTCAGTGGATGAATTTTTGCATTCCCTGGGTCTTGAGAAGTATCTCATAACTTTTCAAGCTGAAGAAGTTGATATGACAGCTCTCATGCACATGACGGATGATGATCTGAAGGTCATGGGAATACCAATGGGGCCAAGGAAGAAGATACTTTTAGCCTTAGAATCAAAGGGTTGA 624 0.4391 MYSDRVETGARRSVKERLNGNFVSDSTRPRQITGKRQRQDDKWEHDLFEDDEPRVSKRQVGGQDLRLKLQKKGFQSAIQSGKNSVPGMRDLREKLSGTMTQQPKNSDPPKSKVEVVKSSSKSVIVEASAPHVKKATDPAPKKKTSQKTGGSVDEFLHSLGLEKYLITFQAEEVDMTALMHMTDDDLKVMGIPMGPRKKILLALESKG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1117 207 CDD SAM_superfamily 151 204 - -
Lele37g1117 207 Pfam SAM domain (Sterile alpha motif) 150 204 IPR001660 GO:0005515
Lele37g1117 207 PANTHER SCP160 96 203 - -
Lele37g1117 207 MobiDBLite consensus disorder prediction 31 64 - -
Lele37g1117 207 FunFam Sterile alpha motif domain-containing protein 149 207 - -
Lele37g1117 207 MobiDBLite consensus disorder prediction 97 150 - -
Lele37g1117 207 Gene3D - 150 207 IPR013761 -
Lele37g1117 207 MobiDBLite consensus disorder prediction 1 64 - -
Lele37g1117 207 SUPERFAMILY SAM/Pointed domain 147 204 IPR013761 -
Lele37g1117 207 MobiDBLite consensus disorder prediction 97 125 - -
Lele37g1117 207 SMART SAM_4 144 207 IPR001660 GO:0005515
Lele37g1117 207 ProSiteProfiles SAM domain profile. 147 201 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1117 Lele-ChrLele37 20817648 20827182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1117 37 206 Glycosyltransferase AT3G07170 64.118 1.16e-66 201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1117 37 20817648 20827182 Lele39g0297 39 2031867 2036126 hybridization
Lele37g1117 37 20817648 20827182 Lele40g0936 40 19890030 19895061 hybridization