Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1114 ATGTGTATGAAATGCCTTAGACTTAAGATTAAGCTTTATGGGATGCTAAATCATCCACAGTCAGCAGTTGTTAAAGATGCCGCTTTTCACACTTTTTTTTACTCAAATGGCCGCATTCAACGTTCTCAAGTACCGAGATTTGACAGTGGGGAAAATGAGGATAATGTTCCTTATACAGGTTATTCTGAGAAGGCACAGAAAGATCGAACTGGCTCAAAGATGAATCCAAATGTTCCCGACGGAAATCCAGATTTAGTTCATGATAATGCATCTTCTTCCAATCTCGCACCCACTGAACCCATGGTTAATTCAGAGGATCAAACTGGAAAAGGATCAGTGAGATCAACACTTGAATTACAAAAGAGCAAGGATGATGCTGGTCCTAAGCCTTTTACTGACTCTCCAGCTCGTCATGACAAGACGGGCAATAGAAGTGGCATTGATTCTACACATCGTCAGGGACTAGGTTCTGCTGACACACGTCAAAAAACTGCAAGGCAAAGTGCTGTGTCTGAGTATAGTATTGAACGCTCACCATTTCATCGCCTGGCAAAGACCCCGGGCAGAGACAGTCCCTCTTGGGACGGAAAGAATTCCTATGACAGCAGCCATGGTACACCAGGAAGATCCCGACTAAGAACACCTAATCGAGGAGATGAATCTCCTGATAAAGCTGCTGCTGTTCCCAAATTTGGTGATTGGGATGAAAATGACCCTGCATCAGCTGATGGCTACACTCAACTTTTCAACCAAGTGAAGGAGGAGAGAGCTGGTGGTGGACAAGCGCCTGGCACACCCACCCAGAGACCATATGTTGTCCGAAACCGAGATACTAATGACAAAGCAAAGAGTTGCTGCTTTGGCTGTATTCTTGTGATTGATCATGAGAACCATCGGGACAATCGGGACGCGACCTTTTCACTGGTGCCTATCGAGAGATCTGAGGAGGTAGAAAGAGGGGGGTCGTCTGACGGAGAGAAACAGTTAGCAATGGCGTGGAGAGGGAATCTTTCTAAGTACCTGAAGGAGGTTCGGTTTCTGATGTGCCAGACATCACCTGCAAGCTCAACCGCAAGGGCATTTGTTGAGAAGAATTATAAGGAGCTAAAGACATTGAACCCCAAATTGCCAATATTGATCCGTGAATGCAGTGGGGTCGAACCCCAATTGTGGGCAAGATATGATTTGGGTGTTGAGAAAGGCATCAGATTGGAAGGTTTAACAGAGGAGCAGATTTCTAAGGCACTTCAAGATCTGGTAAAAGCTGGAGAGTCTTTGAAAGCTTGA 1287 0.4545 MCMKCLRLKIKLYGMLNHPQSAVVKDAAFHTFFYSNGRIQRSQVPRFDSGENEDNVPYTGYSEKAQKDRTGSKMNPNVPDGNPDLVHDNASSSNLAPTEPMVNSEDQTGKGSVRSTLELQKSKDDAGPKPFTDSPARHDKTGNRSGIDSTHRQGLGSADTRQKTARQSAVSEYSIERSPFHRLAKTPGRDSPSWDGKNSYDSSHGTPGRSRLRTPNRGDESPDKAAAVPKFGDWDENDPASADGYTQLFNQVKEERAGGGQAPGTPTQRPYVVRNRDTNDKAKSCCFGCILVIDHENHRDNRDATFSLVPIERSEEVERGGSSDGEKQLAMAWRGNLSKYLKEVRFLMCQTSPASSTARAFVEKNYKELKTLNPKLPILIRECSGVEPQLWARYDLGVEKGIRLEGLTEEQISKALQDLVKAGESLKA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1114 428 MobiDBLite consensus disorder prediction 192 210 - -
Lele37g1114 428 MobiDBLite consensus disorder prediction 86 116 - -
Lele37g1114 428 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT 331 425 IPR016464 -
Lele37g1114 428 Gene3D Glutaredoxin 329 422 - -
Lele37g1114 428 SMART L51_S25_CI_B8_2 350 423 IPR007741 -
Lele37g1114 428 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 222 256 IPR008700 -
Lele37g1114 428 SUPERFAMILY Thioredoxin-like 341 422 IPR036249 -
Lele37g1114 428 Pfam Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 358 408 IPR007741 -
Lele37g1114 428 MobiDBLite consensus disorder prediction 117 146 - -
Lele37g1114 428 FunFam NADH-ubiquinone oxidoreductase 10.5 kDa subunit 332 422 - -
Lele37g1114 428 MobiDBLite consensus disorder prediction 147 174 - -
Lele37g1114 428 MobiDBLite consensus disorder prediction 44 243 - -
Lele37g1114 428 MobiDBLite consensus disorder prediction 213 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1114 Lele-ChrLele37 20798393 20803751 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1114 37 20798393 20803751 Lele39g0299 39 2043955 2057199 hybridization
Lele37g1114 37 20798393 20803751 Lele40g0934 40 19873648 19881311 hybridization