Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0399 ATGGAATCCATCGGTGTCCTCATGCTCTACCCAATGTTCTCCTACTTGGAGCAAGAGCTCGATAAGCGCTACAAGCTCTACCGCTACTGGAATTACCCACAAAGCGTCCAGTTCCTCAAGGAACACGCCAATTCTATCCGCGCCGTCGTCGGTAACTCCAACTACGGCGCTGACGATGCGCTCATCGAAGCCTTACCCAAGCTGGAGATCGTGTCTAGCTTCAGCGTTGGAGTGGATAAGATTGACTTGAACAAGTGTAGGGAAAAGGGGATTCGGGTTACAAATACACCTGATGTGTTGACCGATGAAGTCGCCGACTTGACGATCGGCTTGATTCTGGCCGTGTTGAGGAGGCTCTGTGAGTGTGATCGGTATGTGAGGAGCGGGAAATGGAAGAGGGGTGACTACAAGTTGACTACTAAGTTCTCCGGGAAAACAGTTGGCATTATTGGTTTGGGAAGGATTGGCCAGGCTGTAGCCAAGAGAGCTGAAGGATTCAACTGTAAAATAAGCTACTACTCTAGAACAGAGAAACCAGGCTCAAATTACAAGTACTATCCAACCGTTGTAGAGTTAGCATCCAACTGTGATATTCTGGTTGTTGCATGTCCTCTTACAGAGGAAACCCACCATATCATCAACCGTGAGGTGCTTAACGCCCTCGGTCCCAAGGGTGTTCTTATTAACATCGGTCGAGGTAAGCACGTTGATGAACAAGAACTGGTCCCTGCACTTCTTGAAGGCAGAGTGGGTGGTGCTGGACTAGATGTGTTCGAAGATGAACCTAATGTACCAGAAGAGTTGTTTGGGCTAGAAAACGTTGTGTTATTGCCTCATATTGGAAGCGGCACTGTTGAAACTCGCACCGCCATGGCTGACCTTGTCCTTGGAAATCTTGAGGCTTACTTCCAGAACAAGCCACTGTTAACTCCATTGGTTTAA 942 0.483 MESIGVLMLYPMFSYLEQELDKRYKLYRYWNYPQSVQFLKEHANSIRAVVGNSNYGADDALIEALPKLEIVSSFSVGVDKIDLNKCREKGIRVTNTPDVLTDEVADLTIGLILAVLRRLCECDRYVRSGKWKRGDYKLTTKFSGKTVGIIGLGRIGQAVAKRAEGFNCKISYYSRTEKPGSNYKYYPTVVELASNCDILVVACPLTEETHHIINREVLNALGPKGVLINIGRGKHVDEQELVPALLEGRVGGAGLDVFEDEPNVPEELFGLENVVLLPHIGSGTVETRTAMADLVLGNLEAYFQNKPLLTPLV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0399 313 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 IPR029752 -
Lele37g0399 313 CDD HPPR 4 303 - -
Lele37g0399 313 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 135 - -
Lele37g0399 313 FunFam Putative 2-hydroxyacid dehydrogenase 101 284 - -
Lele37g0399 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 IPR006140 GO:0051287
Lele37g0399 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 310 IPR006139 GO:0016616|GO:0051287
Lele37g0399 313 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 308 - -
Lele37g0399 313 Gene3D - 101 284 - -
Lele37g0399 313 Gene3D - 17 307 - -
Lele37g0399 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 282 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0399 Lele-ChrLele37 3344276 3346732 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0399 37 3344276 3346732 Lele39g1029 39 18958462 18963425 hybridization
Lele37g0399 37 3344276 3346732 Lele40g0354 40 2930210 2933151 hybridization