Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0354 ATGGAATCCATCGGTGTCCTCATGCTTGGTCCAATGTTCTCCTACCTGGAGCAAGAGCTCGATAAGCGCTACAAGCTCTACCGTTACTGGAATTACCCACAAAGCGTCCAGTTCCTCAAGGAAAACGCCAATTCCATTCGTGCCGTCGTCGGGAACTCCAAATACGGCGTCGACGCTGCGCTCGTCGACGCCTTGCCCAAGCTGGAAATCTTGTCTAGCTTCAGCGTTGGAGTCGATAATATTGACTTGAACAAGTGTAGGGAAAGGGGGATTCGGGTTACAAATACAGCTGATGTGTTGACCGATGAAGTCGCCGACCTGACGATCGGCTTGATTCTGTCTGTGTTGAGGAGGCTCTGTGAGTGTGATCGGTATGTGAGGAGCGGGAAATGGAAGAAGGGTGACTACAGGTTGACCACTAAGTTGCAGCCCTGGCAGATAGCTTGTTTCTCTAAGTGCCAAGCCTTAATACTGATTTTCTCCGGGAAAACAGTTGGCATTATTGGTTTGGGAAGGATTGGCCAGGCTGTAGCTAAGAGAGCTGAAGGATTCAACTGTAAAATAAGCTACTACTCTAGAACAGAGAAACCGGACTCAAATTACAAGTACTATCCAAGCGTTGTAGAGTTAGCATCCAACTGTGATATTCTGGTTGTTGCATGCGCTCTTACAGAGGAAACCCACCATATCATCAACCGCGAGGTGCTTAACTCCTTCGGTCCCAAGGGTGTTCTTATTAACATCGGTCGAGGTAAGCTTGTCGATGAACGAGAACTGGTCCCTGCTCTTCTTGAAGGCAGATTGGGTGGTGCTGGATTAGATGTGTTTGAAGATGAACCTAATGTACCAGAAGAGTTGTTTGGGCTCGAAAACGTTGTGTTATTGCCTCATATTGGAAGCGCCACCGTTGAAACTCGCACAGCCATGGCTGACCTTGTCCTTGGAAATCTAGAGGCGTACTTCCAGAACAAGCCACTGTTAACTCCATTGGTTTAA 996 0.4799 MESIGVLMLGPMFSYLEQELDKRYKLYRYWNYPQSVQFLKENANSIRAVVGNSKYGVDAALVDALPKLEILSSFSVGVDNIDLNKCRERGIRVTNTADVLTDEVADLTIGLILSVLRRLCECDRYVRSGKWKKGDYRLTTKLQPWQIACFSKCQALILIFSGKTVGIIGLGRIGQAVAKRAEGFNCKISYYSRTEKPDSNYKYYPSVVELASNCDILVVACALTEETHHIINREVLNSFGPKGVLINIGRGKLVDERELVPALLEGRLGGAGLDVFEDEPNVPEELFGLENVVLLPHIGSATVETRTAMADLVLGNLEAYFQNKPLLTPLV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0354 331 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 326 - -
Lele40g0354 331 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 165 192 IPR029752 -
Lele40g0354 331 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 5 136 - -
Lele40g0354 331 CDD HPPR 4 321 - -
Lele40g0354 331 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 328 IPR006139 GO:0016616|GO:0051287
Lele40g0354 331 Gene3D - 17 325 - -
Lele40g0354 331 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 300 IPR036291 -
Lele40g0354 331 FunFam Putative 2-hydroxyacid dehydrogenase 101 302 - -
Lele40g0354 331 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 299 IPR006140 GO:0051287
Lele40g0354 331 Gene3D - 101 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0354 Lele-ChrLele40 2930210 2933151 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0399 37 3344276 3346732 Lele40g0354 40 2930210 2933151 hybridization
Lele38g0378 38 3077789 3080403 Lele40g0354 40 2930210 2933151 hybridization