Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0349 ATGTACAGAGCGGCAGCTTCACCGCTGAGGTCTCTCAAGGGCCGTGCGAGTAACTTGGGAACTACTAGATTTGCAACCTCAAGTGCAGTAGCTACAAGGCCTACCTCTGAAGGGTTTTTTAGCTGGCTTACTGGAGAACGTTCAAATTCTCTTCCCCCTTTGGATACACCACTTGGGGGTATTACTCTTCCAGCTCCTGTACCAGATTATGTTGAACCAAGCAAGACCAAGATCACAACCCTCTCCAATGGTGTTAAAATAGCATCAGAGACGTCATCAAACCCTGCAGCTTCTATAGGGTTATATATTGACTCTGGTTCCATATATGAGACACCATTTTCAAGTGGAGCATCACACTTGTTAGAGAGAATGGCTTTCAAGAGCACTACAAATCGAAGTCACTTTCGCATTGTGAGGGAAGTAGAGGCAATTGGCGGTAATATTGGTGCCTCAGCCTCTAGGGAGCAAATGGGCTACACATTTGATGCTCTGAAGAGCTATGTTCCACAGATGGTAGAATTGCTAGTTGATTGTCTGCAAAAGGTGAAAGCAGAGCTTGGAGAACTTTCAAACAATCCTCAGGGTTTGCTTTTGGAGGCAATTCATTCTGCTGGTTATTCTGGTGCATTGGCTAATCCTCTTTTGGCTCCTGAATCAGCATTTGAAAGACTGGATGGCTTTGTTTTGGAGAATTTTGTTGCTGAGCATTACACTGCACCCAGAATGGTACTTGCAGCTTACGGGGTCGATCATGAAGAACTTGTATCTGTTGCAGAGCCACTTCTCTCTGATCTACCAAGTGTTTCCCCTCCCGAAGAACCAAGTTCTGTCTACGTTGGAGGTGATTTCCGTCGTCAAGGTGAAGCAGGAGGTGCTCATGTTGCTATTGCTTTTGAAGTGCCTGGTGGTTGGCACGAAGAGAAAGATGCCATAGTTTTAACTGTTCTGCAGATGCTTATGGGAGGTGGCGGTTCATTCTCTGCTGGGGGGCCTGGAAAAGGGATGCACTCAAGGCTATATCTTCGTGTCTTGAATGAGCATCAAGAGGTTCAATCCTTCTCTGCATTCAACAGTATCTTCAACAAAACAGGATTGTTTGGCATTTACGCAAGCACTAGCTCTGATTTTGTGTCAGACGTTGTGGATATAGCAGCCAATGAATTAATAGCAGTCGCATCTCCTGGACAAGGTTTTGCATGCATCTCTTATTTTCTATACAGTCTACTTGTGAAGATGATTGCATCGGAGGACATAGGAAGACAGGTTTTGACTTATGGAGAAAGGAAACCTGTGGAGCAGTTCTTGAAGGCCGTAGATGAAATCACGGTGAATGATATTACTAAGATTGCTGAGAAGATTATCTCCTCGCCTTTGACAATGGCATCATATGGGGATGTTCTAAATGTCCCCAGTTATGAATCTGTTAACCGCAAGTTTCATGCAAAATGA 1449 0.4458 MYRAAASPLRSLKGRASNLGTTRFATSSAVATRPTSEGFFSWLTGERSNSLPPLDTPLGGITLPAPVPDYVEPSKTKITTLSNGVKIASETSSNPAASIGLYIDSGSIYETPFSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKSYVPQMVELLVDCLQKVKAELGELSNNPQGLLLEAIHSAGYSGALANPLLAPESAFERLDGFVLENFVAEHYTAPRMVLAAYGVDHEELVSVAEPLLSDLPSVSPPEEPSSVYVGGDFRRQGEAGGAHVAIAFEVPGGWHEEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEHQEVQSFSAFNSIFNKTGLFGIYASTSSDFVSDVVDIAANELIAVASPGQGFACISYFLYSLLVKMIASEDIGRQVLTYGERKPVEQFLKAVDEITVNDITKIAEKIISSPLTMASYGDVLNVPSYESVNRKFHAK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0349 482 ProSitePatterns Insulinase family, zinc-binding region signature. 106 129 IPR001431 GO:0004222|GO:0006508
Lele37g0349 482 SUPERFAMILY LuxS/MPP-like metallohydrolase 75 271 IPR011249 GO:0046872
Lele37g0349 482 FunFam Mitochondrial-processing peptidase subunit beta 66 267 - -
Lele37g0349 482 Gene3D - 65 264 - -
Lele37g0349 482 Pfam Peptidase M16 inactive domain 229 393 IPR007863 -
Lele37g0349 482 PANTHER METALLOPROTEASE 69 470 - -
Lele37g0349 482 SUPERFAMILY LuxS/MPP-like metallohydrolase 289 473 IPR011249 GO:0046872
Lele37g0349 482 FunFam mitochondrial-processing peptidase subunit alpha 276 475 - -
Lele37g0349 482 Gene3D - 276 398 - -
Lele37g0349 482 Pfam Insulinase (Peptidase family M16) 87 217 IPR011765 -
Lele37g0349 482 Gene3D - 399 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0349 Lele-ChrLele37 2898878 2903266 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0349 37 2898878 2903266 Lele41g0910 41 18619568 18624750 CCT
Lele37g0349 37 2898878 2903266 Lele42g0891 42 21676677 21681538 CCT
Lele37g0349 37 2898878 2903266 Lele43g0497 43 4511430 4516455 CCT
Lele37g0349 37 2898878 2903266 Lele44g0465 44 3521642 3526518 CCT
Lele37g0349 37 2898878 2903266 Lele37g0349 37 2898878 2903266 ECH
Lele37g0349 37 2898878 2903266 Lele39g1077 39 19379215 19383593 hybridization
Lele37g0349 37 2898878 2903266 Lele40g0313 40 2516508 2521056 hybridization