Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1077 ATGTACAGAGCGGCAGCTTTACCGCTGAGGTCTCTCAAGGGCTGTGCGAGTAACTTGAGAACTACTAGATTTGCAACCTCAAGTGCAGTAGCTACGAGGCCTACATCTGAAGGGTTTTTTAGCTGGCTTACTGGAGAACGTTCAAATTCTCTTCCCCCTTTGGATACACCACTTGGGGGTATTACTCTTCCAGCTCCTGTACCAGATTATGTTGAACCAAGCAAGACCAAGATCACAACCCTCTCCAATGGTGTTAAAATAGCATCAGAGACGTCATCAAACCCTGCAGCTTCCATAGGGTTATATCTTGACTCTGGTTCCATATATGAGACACCATTTTCAAGTGGAGCATCACACTTGTTAGAGAGAATGGCTTTCAAGAGCACTACAAATCGAAGTCACTTTCGCATTGTGAGGGAAGTAGAGGCAATTGGCGGTAATATTGGTGCCTCAGCCTCTAGGGAGCAAATGGGCTACACATTTGATGCTCTGAAGAGCTATGTTCCACAGATGGTAGAATTGCTAGTTGATTGTGTAAGGAACCCAATCTTTTTAGATTGGGAGGTCAGAGAAGAGCTGCAAAAGGTGAAAGCAGAGCTTGGAGAACTTTCAAACAATCCTCAGGGTTTGCTTTTGGAGGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTAATCCTCTTTTGGCTCCTGAATCAGCATTTGATAGACTGGATGGCTTTGTTTTGGAGAATTTTGTTGCTGAGCATTACACTGCACCCAGAATGGTACTTGCAGCTTATGGGGTTGATCATGAAGAACTTGTATCTGTTGCAGAGCCACTTCTCGCTGATCTACCAAGTGTTTCCCCTCCTGAAGAACCAAGATCTGTCTACGTTGGAGGTGATTTCCGTCGTCAAGGTGAAGCAGGAGGTGCTCATGTTGCTATTGCTTTTGAAGTGCCTGGTGGTTGGCACGAAGAGAAAGATGCCATAGTTTTAACTGTTCTGCAGATGCTTATGGGAGGTGGCGGTTCATTCTCTGCTGGGGGGCCTGGAAAAGGGATGCACTCAAGACTATATCTTCGTGTCTTGAATGAGCATCAAGAGGTTCAATCCTTCTCTGCATTCAACAGTATCTTCAACAAAACAGGATTGTTTGGCATTTACGCAAGCACTAGCTCTGATTTTGTGTCAGACGCTGTGGATATAGCAGCCAATGAATTAATAGCAGTCGCATCTCCTGGACAAGTTTCACAGGTACAGCTCAATCGCGCCAAAGAATCCACTAAGTCTGCTGTTTTAATGAATCTGGAATCTAGAATGATTGCATCAGAGGACATAGGAAGACAGGTTTTGACTTATGGAGAAAGGAAACCTGTGGAACAGTTCTTGAAGGCCATAGATGAAATCACGGTGAATGATATTACTAAGATTGCTGAGAAGATTATCTCCTCACCTTTGACAATGGCATCACATGGGGATGTTCTAAATGTCCCCAGTTATGAATCTGTTAACCGCAAGTTTCATGCAAAATGA 1518 0.4433 MYRAAALPLRSLKGCASNLRTTRFATSSAVATRPTSEGFFSWLTGERSNSLPPLDTPLGGITLPAPVPDYVEPSKTKITTLSNGVKIASETSSNPAASIGLYLDSGSIYETPFSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKSYVPQMVELLVDCVRNPIFLDWEVREELQKVKAELGELSNNPQGLLLEAIHSAGYSGALANPLLAPESAFDRLDGFVLENFVAEHYTAPRMVLAAYGVDHEELVSVAEPLLADLPSVSPPEEPRSVYVGGDFRRQGEAGGAHVAIAFEVPGGWHEEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEHQEVQSFSAFNSIFNKTGLFGIYASTSSDFVSDAVDIAANELIAVASPGQVSQVQLNRAKESTKSAVLMNLESRMIASEDIGRQVLTYGERKPVEQFLKAIDEITVNDITKIAEKIISSPLTMASHGDVLNVPSYESVNRKFHAK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1077 505 ProSitePatterns Insulinase family, zinc-binding region signature. 106 129 IPR001431 GO:0004222|GO:0006508
Lele39g1077 505 PANTHER METALLOPROTEASE 69 493 - -
Lele39g1077 505 FunFam mitochondrial-processing peptidase subunit alpha 290 498 - -
Lele39g1077 505 Gene3D - 65 277 - -
Lele39g1077 505 SUPERFAMILY LuxS/MPP-like metallohydrolase 75 285 IPR011249 GO:0046872
Lele39g1077 505 Gene3D - 290 502 - -
Lele39g1077 505 SUPERFAMILY LuxS/MPP-like metallohydrolase 303 496 IPR011249 GO:0046872
Lele39g1077 505 Pfam Peptidase M16 inactive domain 243 421 IPR007863 -
Lele39g1077 505 Pfam Insulinase (Peptidase family M16) 87 232 IPR011765 -
Lele39g1077 505 FunFam Mitochondrial-processing peptidase subunit beta 66 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1077 Lele-ChrLele39 19379215 19383593 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1077 39 19379215 19383593 Lele39g1077 39 19379215 19383593 ECH
Lele37g0349 37 2898878 2903266 Lele39g1077 39 19379215 19383593 hybridization
Lele38g0333 38 2640059 2644617 Lele39g1077 39 19379215 19383593 hybridization