Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1196 ATGAGATATAAGACGTTCTTAGAGATTGAAAGACTGAAGGAGAGTATGAAGGAGTATGGTTTAAAGACAGCAATATCTTTACTAAAACAAACAGCAAATACAAAATTTGTAGGAACAGTAGAAGCCCATTTTCGTCTCAACATTGACCCTAAAAATTATGATCAACAACTGAGAGCAACGTTTATTTTCCTAGGGGAACAGTTCAATGAAGCAAAAAATGCTGCAGCAGATTTGGTGGGTGGAGAGGACCTGATAGAACGGATAAAAGGAGGATTTATAGAATTTGATAAATTGATTGCTTCTCCTGATATGATGCCTAAGATTTCTAGTCTAGAGAAAATCCTGGGTCCAAGGGGCCTGATGCCTGATCCAAAAGATGGTACTGTAACAGCCAATATTCCTCAGGTGGAAACTTTCGACTCTAAGGCTATAGCAGAATTGAAGCAAGCAAAGTTCGAATACAGGGCAGATAAAACTGGAATTGTGCATTTGCCTTTCGGAACCGAGGAGGACCTTCTGGCAAACTTAATTGCCGCAATAAAATCAGTAGAAACAAACAAACCATCTGGGGCTAAAGGTGTTTACTGGAGAAGTGCACACGTATCAGCAATGGGACCTTCTATCAGGAAAAGTGACATAGAGCCCAGGGATGAAGATGGAGATCCTTTGGTGGCTGTATCTACGTTGAAAGATGGCCCTAGCCAAAAGGCAAAAGTTGAATGCAGGCGGCATTGTCTCTGA 741 0.4116 MRYKTFLEIERLKESMKEYGLKTAISLLKQTANTKFVGTVEAHFRLNIDPKNYDQQLRATFIFLGEQFNEAKNAAADLVGGEDLIERIKGGFIEFDKLIASPDMMPKISSLEKILGPRGLMPDPKDGTVTANIPQVETFDSKAIAELKQAKFEYRADKTGIVHLPFGTEEDLLANLIAAIKSVETNKPSGAKGVYWRSAHVSAMGPSIRKSDIEPRDEDGDPLVAVSTLKDGPSQKAKVECRRHCL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1196 246 SUPERFAMILY Ribosomal protein L1 17 208 IPR023674 -
Lele32g1196 246 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 210 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Lele32g1196 246 Gene3D - 65 150 IPR016095 -
Lele32g1196 246 Pfam Ribosomal protein L1p/L10e family 59 202 IPR028364 -
Lele32g1196 246 Gene3D - 151 209 - -
Lele32g1196 246 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 13 211 - -
Lele32g1196 246 CDD Ribosomal_L1 21 209 IPR028364 -
Lele32g1196 246 Gene3D - 17 61 - -
Lele32g1196 246 FunFam 50S ribosomal protein L1 52 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1196 Lele-ChrLele32 12673224 12677533 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1359 29 20266823 20272214 Lele32g1196 32 12673224 12677533 hybridization
Lele30g0194 30 2054122 2059376 Lele32g1196 32 12673224 12677533 hybridization