Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0194 ATGGCGACTTGCGCCACACATTCATCTCTCATGCTCACTCCTCACACTTCCCCTGTACATCCACAAAACCTCACTCCTTCGCGTTCCTCCTTCAATCCTAATCCCTTGTCTAGAAATTTCTCTCTCTACCCATTGCGTTTGACGTCTAGAGCGAGAATCTCTGGCAGATGGATCGACGTAAAATTGCAGAAGGAAGCTAATTCTAGGGCTTCCATTGTTGTTGTCGCTGAGAGTGTTGAACAGAGGGATGGTGGCTCCGCCACGAATACTGTTACTAAACCCAAGACTAACAAAGGGAGGGCCGCATTGCCTCTCAAAAGGGACAGGATGAGATATAAGAGGTTCTTAGAGATTGAAAGACTGAGGGAGAGTATGAAGGAGTATGGTTTAAAGACAGCAATATCTTTACTAAAACAAACAGCAAATACAAAATTTGTAGGAACAGTAGAAGCCCATTTTCGTCTCAACATTGACCCTAAACATTATGATCAACAACTGAGAGCAACGGTAAATTTACCCAAGGGAATTGGAAAGCCTGTCAAAGTGGCTGTTCTTACTCAAGGGGAACAGTTCAATGAAGCAAAAAATGCTGGAGCAGATTTGGTGGGTGGAGAGGACTTGATAGAACAGATAAAAGGAGGATTTACAGAATTTGATAAATTGATTGCTTCTCCTGATATGATGCCTAAGGTTTCTAGTCTAGAGAAAATCCTGGGGCCAAGGGGCCTGATGCCTGATCCAAAAGATGGTACTGTAACAGCCAATATTCCTCAGGCTATAGCAGAATTGAAGCAAGCAAAGTTCGAATACAGGGCAGATAAAACTGGAATTGTGCATTTGCCTTTCGGAAAAACCGACTTTTCCAAGGAGGACCTTCTGGCAAACTTAATTGCCGCAATAAAATCAGTAGAAACAAACAAACCATCTGGTGCTAAGGGTGTTTACTGGAGAAGTGCTCACATATCAGCAATGGGACCTTCTATCAGGTTAAACATCAGAGGGATGCTGGATCAAAACTCACAAGCTTCCATCTGA 1035 0.4319 MATCATHSSLMLTPHTSPVHPQNLTPSRSSFNPNPLSRNFSLYPLRLTSRARISGRWIDVKLQKEANSRASIVVVAESVEQRDGGSATNTVTKPKTNKGRAALPLKRDRMRYKRFLEIERLRESMKEYGLKTAISLLKQTANTKFVGTVEAHFRLNIDPKHYDQQLRATVNLPKGIGKPVKVAVLTQGEQFNEAKNAGADLVGGEDLIEQIKGGFTEFDKLIASPDMMPKVSSLEKILGPRGLMPDPKDGTVTANIPQAIAELKQAKFEYRADKTGIVHLPFGKTDFSKEDLLANLIAAIKSVETNKPSGAKGVYWRSAHISAMGPSIRLNIRGMLDQNSQASI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0194 344 TIGRFAM rplA_bact: ribosomal protein uL1 112 333 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Lele30g0194 344 Pfam Ribosomal protein L1p/L10e family 137 322 IPR028364 -
Lele30g0194 344 FunFam 50S ribosomal protein L1 175 266 - -
Lele30g0194 344 SUPERFAMILY Ribosomal protein L1 124 332 IPR023674 -
Lele30g0194 344 Gene3D - 175 266 IPR016095 -
Lele30g0194 344 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 80 338 - -
Lele30g0194 344 MobiDBLite consensus disorder prediction 1 32 - -
Lele30g0194 344 Gene3D - 128 330 - -
Lele30g0194 344 Hamap 50S ribosomal protein L1 [rplA]. 106 335 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Lele30g0194 344 CDD Ribosomal_L1 130 330 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0194 Lele-ChrLele30 2054122 2059376 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0194 30 2054122 2059376 Lele31g0216 31 2176985 2182644 hybridization
Lele30g0194 30 2054122 2059376 Lele32g1196 32 12673224 12677533 hybridization