Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1186 ATGGATACGGCAGAATCTCATGCTACTTCACTGCTTCTTTCTTTAATTTCAAGAATACAGTTTTTGGGCATGGAAATGCTATCGTATGGTTCGGCACCAAGTTGTTGTGTAGTGAATTCAAAGTCGAAATGGAGTGAAAGGTGCTTCAATTCCCCACAATTAGGGTTTCCCACGGCGGGAAATCATGGAATTCATAATTATAACACAATTTCTAGATTCTATAACATTGAAAGAGGTCATAGGTCCTTAAATACTCTTAAGGGCTCTAAACAAAAAAAATCCAAGGTTTATAGTGGAGGCTATGATGGTTTTGTGATTGATGGTGAAGAGGATGTAAGAGATATCTCCGGAATAGAACAACCTGCTACTAAGGTTCGCATTCCTGGTCTGCCAAATGATCCAAAGGGGGAATCTGGTGCTGGGATAAGAAGTTGCTTTTGGGAGTGGAAGCCAAAGCTTAACGTGCACTATGAAAAGGCTGGGTGTGAAAATTTGGAATCCCCGCAGATTCTCTTTCTTCCTGGTTTTGGTGTTGGTGCTTTCCATTATGAGAAGCAAATGAAGGATTTGGGCCGTGACTTTAGAGTATGGGCATTGGATTTCCTAGGTCAAGGGATGTCACTGCCTTTTGAAGATCCCACACTTCAATCTAAAGCAGGGGGTGCAGCTAATGGCGAAACTTTGTGGGGTTTCGGGGATGAAACTGAACCATGGGCAGAAAAGCTTGTGTATTCTATGGATTTATGGCAGGATCAAGTTCGCTACTTTATAGAAAAGGTAATTGGTGAACCGGTCTATATTGTGGGCAACTCATTAGGAGGATTTGTTGCGTTGTATTTTGCGGCAGGTAATCCTCATTTAGTAAAGGGAGTCACATTGCTCAATGCAACACCGTTTTGGGGTTTTTTGCCCAATCCTGTGAGAAATCCAGGACTTGCAAAAGTATTTCCATGGGCGGGAACATTTCCTCTACCCCCACGTGTGAAAAGGCTGACAGAGTTGTTGTGGGAGAAAATTAGTGATCCAAAAAGTATCGCTGAGATACTTAAGCAGGTTTATGCAGATCATTCGACAAAGGTAGATAATGTGTTTTTGCGTATAGTTGAAACGACAAGGCATCCAGCTGCTTCTGCATCATTTGCTTCAATTATGTTTGCTCCTCAGGCAGAATTATCCTTCGACGACACATTATCTAGATGTCGAGCCAACAACGTGTCAATCTGCCTCATGTATGGTAAAGAAGATCCCTGGGTGAGGCCAATTTGGGGACTTCAGGTTAAAAAGAAGGTTCCTGAAGCTCCATATTATCAAATCAGCCCAGCCGGTCATTGTCCTCATGATGAAGTTCCAGAGGTCATAAATTTCTTACTACGTGGGTGGATAAAGAACCTGGAGTCTCAAGGTTCTTTCTCACTACCTCTGCTTGATGACTCAGACAATACAAAATTCAGCATAGCCAAGGAGTTAGAATTTACAAGAGGAGGCTTAAAAAAATCAGTGTTGGTTAGATATGTAGGTAATAATAGTTTCACACTTTGGGACCGGATCCGATCTTACATCAATTCTCAGACCAAGCTCAGGAACCTGTCACTCAAATCTCGGCGATACTGTGAATGA 1617 0.4224 MDTAESHATSLLLSLISRIQFLGMEMLSYGSAPSCCVVNSKSKWSERCFNSPQLGFPTAGNHGIHNYNTISRFYNIERGHRSLNTLKGSKQKKSKVYSGGYDGFVIDGEEDVRDISGIEQPATKVRIPGLPNDPKGESGAGIRSCFWEWKPKLNVHYEKAGCENLESPQILFLPGFGVGAFHYEKQMKDLGRDFRVWALDFLGQGMSLPFEDPTLQSKAGGAANGETLWGFGDETEPWAEKLVYSMDLWQDQVRYFIEKVIGEPVYIVGNSLGGFVALYFAAGNPHLVKGVTLLNATPFWGFLPNPVRNPGLAKVFPWAGTFPLPPRVKRLTELLWEKISDPKSIAEILKQVYADHSTKVDNVFLRIVETTRHPAASASFASIMFAPQAELSFDDTLSRCRANNVSICLMYGKEDPWVRPIWGLQVKKKVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIKNLESQGSFSLPLLDDSDNTKFSIAKELEFTRGGLKKSVLVRYVGNNSFTLWDRIRSYINSQTKLRNLSLKSRRYCE 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1186 538 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 24 525 IPR044211 GO:0015996|GO:0080124
Lele32g1186 538 SUPERFAMILY alpha/beta-Hydrolases 142 461 IPR029058 -
Lele32g1186 538 Pfam Alpha/beta hydrolase family 170 452 IPR000073 -
Lele32g1186 538 Gene3D alpha/beta hydrolase 134 464 IPR029058 -
Lele32g1186 538 FunFam Pheophytinase, chloroplastic 138 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1186 Lele-ChrLele32 12243650 12250110 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1351 29 20170754 20174480 Lele32g1186 32 12243650 12250110 hybridization
Lele30g0203 30 2389104 2392662 Lele32g1186 32 12243650 12250110 hybridization