Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0203 ATGGAAATTCTATCGTATGGTTCGGCACCAAGTTGTTGTGTAGTGAATTCAAAGTCGAAATTGAGTGAAAGGTGCTTCAATTCCCCACAATTAGGGTTTCCCACGGCGGGAAATCATGGACTTCATAATTATAACACAGTTTCTAGATTCTATAACATTGAAAGAGGTCATAGGTCCTTAAATACTCTTAAGGGCTCTAAACAAAAAAAATCCAAGGTTTATAGTGGAGGCTATGATGATTTTTTGATTGATGGTGAAGGGGATGTAAGAGATATCTCCGGAATAGAACAACCTGCTACTAAGGTTCGCATTCCTGGTCTGCCAAATGAGCCAAAGGGGGAATCTGGTGCTGTGATAAGAAGTTGCTTTTGGGAGTGGAAGCCCAAGCTTAACGTGCACTATGAAAAGGCCGGGTGTGAAAATTTGGAATCCCCGCAGATTCTCTTTCTTCCTGGTTTTGGTGTTGGTGCTTTCCATTATGAGAAGCAAATGAAGGATTTGGGCCGTGACTTTAGAGTATGGGCACTGGATTTCCTCGGTCAAGGGATGTCACTGCCTTTTGAAGATCCCACACTTCAATCTAAAGCAGGGGGTGCAGCTAATGGTGAAACTTTGTGGGGTTTCGGGGATGAAACTGAACCATGGGCAGAAAAGCTTGTGTATTCTATGGATTTATGGCAGGATCAAGTTCGCTACTTTATAGAAAAGGTAATTGGTGAACCGGTCTATATTGTGGGCAACTCATTAGGAGGATTTGTTGCGTTGTATTTTGCGGCATGTAATCCTCATTTAGTAAAGGGTGTCACATTGCTCAATGCAACACCGTTTTGGGGTTTTTTCCCCAATCCTGTGAGAAATCCAGGACTTGCAAAAGTATTTCCATGGGCAGGAACATTTCCTCTACCCCCACGTGTGAAGAGGCTGACAGAGTTGTTGTGGGAGAAAATTAGTGATCCAAAAAGTATAGCTGAGATACTTAAGAAGGTTTATGCAGATCATTCGACAAAGGTAGATGATGTGTTTTTGCGTATAGTTGAAACGACAAGGCATCCAGCTGCTGCTGCATCATTTGCTTCAATTATGTTTGCTCCTCAGGCAGAATTATCCTTCGACGACACATTATCTAGATGTCGAGCCAACAACGTGTCAATCTGCCTCATGTATGGTAAAGAAGATCCCTGGGTGAGCCCAATTTGGGGACTTCAGGTTAAAAAGAAGGTTCCTGAAGCTCCATATTATCAAATCAGCCCAGCCGGTCATTGTCCTCATGATGAAGTTCCAGAGGTCATAAATTTCTTACTACGTGGGTGGATAAAGAACCTGGAGTCTCATGGTTCTTTCTCACTACCTCTGCTTGATGACTCAGACAATACAAAATTCAGCATAGCCAAGGAGTTAGAATTTATAAGAGGAGGCTCAAAAAAATCAGTGTTGGTTAGATATGTAGGTAATAATAGTTTCACACTTTGGGACAGGATCCGATCTTACATCAATTCTCAGACCAAGCTCAGGAACCTGACACTCAAATCTCGGCGATACTGTGAATGA 1548 0.4244 MEILSYGSAPSCCVVNSKSKLSERCFNSPQLGFPTAGNHGLHNYNTVSRFYNIERGHRSLNTLKGSKQKKSKVYSGGYDDFLIDGEGDVRDISGIEQPATKVRIPGLPNEPKGESGAVIRSCFWEWKPKLNVHYEKAGCENLESPQILFLPGFGVGAFHYEKQMKDLGRDFRVWALDFLGQGMSLPFEDPTLQSKAGGAANGETLWGFGDETEPWAEKLVYSMDLWQDQVRYFIEKVIGEPVYIVGNSLGGFVALYFAACNPHLVKGVTLLNATPFWGFFPNPVRNPGLAKVFPWAGTFPLPPRVKRLTELLWEKISDPKSIAEILKKVYADHSTKVDDVFLRIVETTRHPAAAASFASIMFAPQAELSFDDTLSRCRANNVSICLMYGKEDPWVSPIWGLQVKKKVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIKNLESHGSFSLPLLDDSDNTKFSIAKELEFIRGGSKKSVLVRYVGNNSFTLWDRIRSYINSQTKLRNLTLKSRRYCE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0203 515 FunFam Pheophytinase, chloroplastic 115 441 - -
Lele30g0203 515 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 1 502 IPR044211 GO:0015996|GO:0080124
Lele30g0203 515 Gene3D alpha/beta hydrolase 114 441 IPR029058 -
Lele30g0203 515 Pfam Alpha/beta hydrolase family 147 429 IPR000073 -
Lele30g0203 515 SUPERFAMILY alpha/beta-Hydrolases 120 438 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0203 Lele-ChrLele30 2389104 2392662 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0203 30 2389104 2392662 Lele31g0224 31 2294209 2298349 hybridization
Lele30g0203 30 2389104 2392662 Lele32g1186 32 12243650 12250110 hybridization