Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1351 ATGGAAATTCTATCGTATGGTTCGGCACCATGTTGTTATGTAGCGAACTCAAAGTCCAAATTGAGTGAAAGGAGCTTCAATTCCCGACGATTAGGGTTTCTCACTGCGGGAAATCATGGAATTCATAATAACAACACCGTTTCTAGATTCTATAACATTGAAAGAGGTCATAGGTCCTTAAATACTCTTAAAGGCTCTAGACAAAATAATTCCAAGGTTTATAGCGGAGGCTATGATGGTTTTGTGATCGATGGTGAAGGGAATGTAAGAGATATCTCAGGAATCGAACAACCGGCTACTAAGGTTCTCATTCCTGGTCTGCCAAATGAGCCCAAGGGGGAATCTGGTGCTGTGATAAGAAGTTGCTTTTGGGAGTGGAAGCCAAAGCTTAATGTACATTATGAAAAGGCCGGGTGTGAAAATTTAGAATCCCCACAGATTCTCTTTCTTCCTGGTTTTGGTGTTGGTGCTTTCCATTATGAGAAGCAAATGAAGGATTTGGGCCGTGACTTTAGAGTATGGGCTCTGGATTTCCTCGGTCAAGGGATGTCACTGCCTTTTGAAGATCCCACACTTCAGTCTAAAGCAGGTAGTGCAGCTAATGGCGAAACTTCTTCGTGGGGTTTTGGCGATGAAACTGAACCATGGGCAGAAAAGCTTGTGTACTCTATGGATTTATGGCAGGATCAAGTTCGCTACTTTATAGAAAAGGTAATTGGCGAACCAGTCTATATTGTGGGCAACTCATTAGGAGGATTTGTTGCGTTGTATTTTGCAGCATGTAATCCTCATTTAGTAAAGGGTGTCACATTGCTCAATGCAACACCGTTTTGGGGTTTTTTGCCCAATCCTGTGAGAAATCCAGGACTTGCAAAAATATTTCCATGGGCAGGAACATTTCCCCTACCCCCTCGTGTGAAGAGGCTGACAGAGTTGTTGTGGGAGAAAATTAGTGATCCAAAAAGTATCGCTGAGATACTTAAGCAGGTTTATGCAGATCATTCAACAAAGGTAGATAATGTGTTTTTGCGTATAGTTGAAACGACAAGGCATCCAGCTGCTGCTGCATCATTTGCTTCAATTATGTTTGCTCCTCAGGCAGAATTATCCTTCGAGGACGCATTATCTAGATGTGGAGCCAACAACGTGTCAATCTGCCTCATGTATGGTAAAGAAGATCCCTGGGTGAGGCCAATTTGGGGACTTCAGGTTAAAAAGAAGGTTCCTGAAGCTCCATATTATCAAATCAGCCCAGCTGGTCATTGTCCTCATGATGAAGTTCCAGAGGTAATAAATTTCTTACTACGTGGGTGGATAAAGAACCTGGAGTCTCAAGGTTCATTCTCACTGCCTCTGCTTGATGACTCACACAATAGTACAAAATTCAGCATAGCCAAGGAGCTAGAATTTATGAGAGAAGGCTCAAAAAAGTCAGTGATGGTTAGATATGTAGGTAATAATAGTTTCACACTTTGGGACAGGATCCGATCTTACATCAATTCTCAGGCCAAGATGAGGAACTTGTCACTAAAATCTTGGTCATAG 1545 0.4227 MEILSYGSAPCCYVANSKSKLSERSFNSRRLGFLTAGNHGIHNNNTVSRFYNIERGHRSLNTLKGSRQNNSKVYSGGYDGFVIDGEGNVRDISGIEQPATKVLIPGLPNEPKGESGAVIRSCFWEWKPKLNVHYEKAGCENLESPQILFLPGFGVGAFHYEKQMKDLGRDFRVWALDFLGQGMSLPFEDPTLQSKAGSAANGETSSWGFGDETEPWAEKLVYSMDLWQDQVRYFIEKVIGEPVYIVGNSLGGFVALYFAACNPHLVKGVTLLNATPFWGFLPNPVRNPGLAKIFPWAGTFPLPPRVKRLTELLWEKISDPKSIAEILKQVYADHSTKVDNVFLRIVETTRHPAAAASFASIMFAPQAELSFEDALSRCGANNVSICLMYGKEDPWVRPIWGLQVKKKVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIKNLESQGSFSLPLLDDSHNSTKFSIAKELEFMREGSKKSVMVRYVGNNSFTLWDRIRSYINSQAKMRNLSLKSWS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1351 514 Pfam Alpha/beta hydrolase family 147 430 IPR000073 -
Lele29g1351 514 Gene3D alpha/beta hydrolase 114 442 IPR029058 -
Lele29g1351 514 FunFam Pheophytinase, chloroplastic 115 442 - -
Lele29g1351 514 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 1 505 IPR044211 GO:0015996|GO:0080124
Lele29g1351 514 SUPERFAMILY alpha/beta-Hydrolases 120 439 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1351 Lele-ChrLele29 20170754 20174480 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1351 29 20170754 20174480 Lele31g0224 31 2294209 2298349 hybridization
Lele29g1351 29 20170754 20174480 Lele32g1186 32 12243650 12250110 hybridization