Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g1179 ATGAGACCCGCGCCCCTTGGTTTAGTTAGGGAACACAACATTCTGTTCCTTAAAGGCTTCATGATCCTGTTCTTCAGTTTCATAACAATCCGTCTCAACTTCTGTGTTTCGAGTATCCCTTCTTCATTAAAATCACTTCCCCTTGAAGGTCATTTCAATTTTGATGATGTTAGCCATGCAGCCAGGGATTTTGGCAACAGGTACCAATATTATCCAACGGCTGTTCTGCATCCGAAATCAGTATCTGATATTGCAGCCATCATCAAGCATATCTGGCAGATGGGTCCTAGGTCCCAGCTCACAGTTGCAGCCAGAGGTCATGGCCACTCACTCCAGGGACAGTCACAAGCTCATGGAGGAGTTGTGATCAATATGGAATCACTCAAGTTCCCTGAAATGCAGGTTTATACAGGAAATTCTCCGTATGTGGATGTCAATGGCGGCGAGCTGTGGATAAACATCCTGCGTGAGAGTCTAAGATATGGGTTAGCACCAAGATCATGGACAGATTACCTGCATCTCACAGTTGGAGGTACTCTGTCTAATGCTGGAATCAGTGGGCAGGCATTTTGTCATGGTCCTCAAATAAGTAACGTTCAGCAGCTGGAGATAGTAACAGGAAAAGGGGAGGTGGTAAATTGTTCTGAGGAGCAGAATGGTGAACTCTTTCACAGTGTACTTGGGGGGCTTGGTCAGTTTGGCATCATAACAAGGGCAAGAATAGTTCTCGAGCCAGCACCTTCTAAGGTAAAATGGATTAGACTGCTATATGCAGATTTCACGGCATTCACGAGAGATCAGGAGAAGTTAATATCTTCAGAAGGCAAATTTGATTACATTGAAGGATTTGTGATAATAAACAGAACTGGTCTGCTAAACAACTGGAGATCATCCTTCAAACCACAAGACCCAGTTCAAGCAAGCCAGTTCAAATCAGATGGAAGGACTCTGTTCTGCCTAGAATTGGCCAAATACTTCAATCCGGAAGACTCTGATGCAGTAAATGAGGTGAGGCAAGCAACAGTTGAAGAGCATTTGTCCCACTTAAACTATATCCCATCAACACTTTTTCTAACAGAAGTCACATATGTTGATTTCTTAGACAGGGTTCATGTCTCTGAGGTCAAATTGCGGTCAGAAGGCTTGTGGGACGTTCCACACCCGTGGCTCAATCTTTTTATACCCAAAAGCAAAATACCCGACTTTGCTGAAGGTGTCTTTGGGAAGATCTTAACAGAAACAAGCAACGGTCCAATTCTCATCTACCCAAGGAGAATGGCATTCAGTGGCTTCTGGATCATTTCTGTTGATCACTGCAATACCTATCACACAACTCAAGTTGCACCAATGCTCCAAAAAGCGGTGGTTCAGACAAATCACCTCGTGGCTCTGGTTTTGAAACCACTCCGTAATCAGCTACACGCAGGTCACTTTTGTTGCCAATAA 1446 0.4419 MRPAPLGLVREHNILFLKGFMILFFSFITIRLNFCVSSIPSSLKSLPLEGHFNFDDVSHAARDFGNRYQYYPTAVLHPKSVSDIAAIIKHIWQMGPRSQLTVAARGHGHSLQGQSQAHGGVVINMESLKFPEMQVYTGNSPYVDVNGGELWINILRESLRYGLAPRSWTDYLHLTVGGTLSNAGISGQAFCHGPQISNVQQLEIVTGKGEVVNCSEEQNGELFHSVLGGLGQFGIITRARIVLEPAPSKVKWIRLLYADFTAFTRDQEKLISSEGKFDYIEGFVIINRTGLLNNWRSSFKPQDPVQASQFKSDGRTLFCLELAKYFNPEDSDAVNEVRQATVEEHLSHLNYIPSTLFLTEVTYVDFLDRVHVSEVKLRSEGLWDVPHPWLNLFIPKSKIPDFAEGVFGKILTETSNGPILIYPRRMAFSGFWIISVDHCNTYHTTQVAPMLQKAVVQTNHLVALVLKPLRNQLHAGHFCCQ 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g1179 481 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 247 424 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lele32g1179 481 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 72 107 IPR006093 GO:0016491
Lele32g1179 481 Gene3D - 56 124 IPR016167 -
Lele32g1179 481 SUPERFAMILY FAD-linked oxidases, C-terminal domain 247 430 IPR016164 GO:0003824|GO:0050660
Lele32g1179 481 FunFam Cytokinin dehydrogenase 1 123 248 - -
Lele32g1179 481 PANTHER GULONOLACTONE OXIDASE 20 439 - -
Lele32g1179 481 Gene3D - 249 424 IPR016170 -
Lele32g1179 481 ProSiteProfiles PCMH-type FAD-binding domain profile. 68 246 IPR016166 GO:0071949
Lele32g1179 481 Pfam FAD binding domain 72 215 IPR006094 GO:0050660
Lele32g1179 481 Gene3D - 125 248 IPR016169 -
Lele32g1179 481 SUPERFAMILY FAD-binding/transporter-associated domain-like 52 245 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g1179 Lele-ChrLele32 12151809 12155232 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1342 29 20068805 20073500 Lele32g1179 32 12151809 12155232 hybridization
Lele30g0209 30 2468205 2470378 Lele32g1179 32 12151809 12155232 hybridization