Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0209 ATGATTCGACCTTTTCTGCCTTCAACCCTCATATCCTTCAACAGGAAAATGAGACCCGCACCACTTGGTTTAGTTAGGGAACACAACATTCTGTTCCTTAAAGGCTTCATGATCCTGTTCTTCAGTTTTATAACAATCCGTCTCAACTTCTGTGTTTCCAGTATCCCTTCTTCATTAAAATCACTTCCCCTTGAAGGTCATTTCAATTTTGATGATGTTAGCCATGCAGCCAGGGATTTTGGCAACAGGTACCAATATTATCCAATGGCTGTTCTGCATCCGAAATCAGTATCTGATATTGCAGCCATCATCAAGCATATCTGGCAGATGGGTCCTAGGTCCCAGCTCACAGTTGCAGCCAGAGGCCATGGCCACTCACTCCAGGGACAGTCACAAGCTCATGGAGGAGTTGTGATCAATATGGAATCACTCAAGTTCCCTGAAATGCAGGTTTATACAGGAAATTCTCCGTATGTGGATGTCAATGGCGGCGAGCTGTGGATAAACATCCTGCTTGAGAGTCTAAGATATGGGTTAGCACCAAGATCATGGACAGATTACCTGCATCTCACAGTTGGTGGTACTCTGTCTAATGCTGGAATCAGTGGGCAGGCATTTTATCATGGTCCCCAAATAAGTAACGTTCAGCAGCTGGAGATAGTAACAGGAAAAGGGGAGGTGGTAAATTGTTCTGAGGAGCAGAATGGTGAACTCTTTCAGAGTGTACTTGGGGGGCTTGGTCAGTTTGGCATCATAACCAGGGCGAGAATAGTTCTCGAACCAGCACCTTCTAAGGTAAAATGGATTAGACTGCTATATGCAGATTTCACAGCATTCACGAGAGATCAGGAGAAGTTAATATCTTCAGAAGGCAAATTTGATTACATTGAAGGATTTGTGATAATAAACAGAACTGGTCTGCTAAACAACTGGAGATCATCCTTCAAACCACAAGATCCAGTTCAAGCAAGTCAGTTCAAATCAGATGGAAGAACTCTGTTCTGCCTAGAATTGGCCAAATACTTCAATCTGGAAGACTCTGATGCAGTAAATGAGGAAGTTGAAGAGCATTTGTCCCACTTAAACTATATCCCATCAACACTTTTTCTAACAGAAGTCACATATGTTGATTTCTTAGACAGAGTTCATGTATCTGAGGTCAAATTGCGGTCAGAAGGCTTGTGGGAAGTTCCACACCCGTGGCTCAATCTTTTTATACCCAAAAGCAAAATACACGACTTTGCTGAAGGTGTCTTTGGGAAAATCTTAACAGAAACAAGCAACGGTCCAATTCTCATCTACCCAGTAAACAAATCAAAGTGGGACAACAGAACCTCTGTAGTTGTTCCTGACGAAGACATTTTCTACTTAGTGGCATTTCTGACCTCTGCAGTTCCTTCTTCCAATGGACCTGATGGCCTACAACATATTTTAACTCAAAATAAAAGGATTCTAGAATACTGCGAAAGTGCCCGTCTTGGGGTAAAGCAATATTTGCCCCACTACACTACACAGGAAGAATGGAGGGCCCACTTTGGTCCTCGGTGGGAAGCATTTCTGCAGAGAAAATCTGCTTATGACCCATTGGCAATACTTGCTCCTGGCCAACGTATATTGCAAAAAGCAATATCCATCTCTTGA 1641 0.429 MIRPFLPSTLISFNRKMRPAPLGLVREHNILFLKGFMILFFSFITIRLNFCVSSIPSSLKSLPLEGHFNFDDVSHAARDFGNRYQYYPMAVLHPKSVSDIAAIIKHIWQMGPRSQLTVAARGHGHSLQGQSQAHGGVVINMESLKFPEMQVYTGNSPYVDVNGGELWINILLESLRYGLAPRSWTDYLHLTVGGTLSNAGISGQAFYHGPQISNVQQLEIVTGKGEVVNCSEEQNGELFQSVLGGLGQFGIITRARIVLEPAPSKVKWIRLLYADFTAFTRDQEKLISSEGKFDYIEGFVIINRTGLLNNWRSSFKPQDPVQASQFKSDGRTLFCLELAKYFNLEDSDAVNEEVEEHLSHLNYIPSTLFLTEVTYVDFLDRVHVSEVKLRSEGLWEVPHPWLNLFIPKSKIHDFAEGVFGKILTETSNGPILIYPVNKSKWDNRTSVVVPDEDIFYLVAFLTSAVPSSNGPDGLQHILTQNKRILEYCESARLGVKQYLPHYTTQEEWRAHFGPRWEAFLQRKSAYDPLAILAPGQRILQKAISIS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0209 546 SUPERFAMILY FAD-linked oxidases, C-terminal domain 263 538 IPR016164 GO:0003824|GO:0050660
Lele30g0209 546 SUPERFAMILY FAD-binding/transporter-associated domain-like 68 261 IPR036318 GO:0050660
Lele30g0209 546 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 88 123 IPR006093 GO:0016491
Lele30g0209 546 FunFam Cytokinin dehydrogenase 2 265 498 - -
Lele30g0209 546 Gene3D - 141 264 IPR016169 -
Lele30g0209 546 ProSiteProfiles PCMH-type FAD-binding domain profile. 84 262 IPR016166 GO:0071949
Lele30g0209 546 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 263 538 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lele30g0209 546 PANTHER GULONOLACTONE OXIDASE 36 538 - -
Lele30g0209 546 Gene3D - 265 498 IPR016170 -
Lele30g0209 546 Gene3D - 72 539 IPR016167 -
Lele30g0209 546 Pfam FAD binding domain 88 231 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0209 Lele-ChrLele30 2468205 2470378 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0209 30 2468205 2470378 Lele31g0235 31 2390397 2392570 hybridization
Lele30g0209 30 2468205 2470378 Lele32g1179 32 12151809 12155232 hybridization