Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1342 ATGATTCGACTTGTTCTGCCTTCAACTACCCTCATATCCTTCAACAGGAAAATGAGACCCCCACCACTTGGTTTAGTTAGGGAACACAACATTCTGTTCCTTAAAGGCTTCATGATCCTGTTCTTCAGTTTCATAACAATCCGACTTAACTTCTGTGTTTCCAGTATCCCTTATTCATTAAACTCATTTCCCCTTGAAGGTCATTTCAATTTTGATGATGTCAGCCATGCAGCCAGGGATTTTGGTAACAGGTACCAATATTATCCAACAGCTGTTCTGCATCCGAAATCGGTATCTGATATTGCAGCCATCATCAAGCATATCTGGCAGATGGGTCCTAGTTCCCAGCTCACAGTTGCAGCCAGAGGCCACGGCCACTCACTCCAGGGACAGTCACAAGCTCATGGAGGAGTTGTGATCAATATGGAATCACTCCAGTTCCCTGAAATGCATGTTTATACAGGAAATTCCCCGTATGTGGATGTCAATGGTGGCGACCTGTGGATACACATCCTGCGTGAGAGTCTAAGATACGGGTTAGCACCAAGATCATGGACAGATTACCTGCATCTGACAGTTGGTGGTACTCTGTCTAATGCTGGAATCAGTGGGCAAGCATTTCGTCATGGTCCTCAAATAAGCAACGTTCGGCAGCTGGAGATAGTAACAGGAAAAGGAGAGGTGGTAAATTGTTCTGAGGAGCAGAATGGTGAACTCTTTCACAGTGTACTTGGGGGGCTTGGTCAGTTTGGCATCATAACCAGGGCAAGAATAGTTCTCGAACCAGCACCTTCTAAGGTAAAATGGATTAGATTGCTATATGCAGATTTCACGGCATTCACGAGAGATCAGGAGAAGTTAATATCTTCAGAAAGCAAATTTGATTACATTGAAGGATTTGTGATAATAAACAGAACTGGTCTGCTAAACAACTGGAGATCGTCCTTCAAACCACAAGACCCAGTTCAAGCAAGTCAGTTCAAATCAGATGGAATAACTCTCTTCTGCCTAGAATTGGCCAAATACTTCAATCTGAAAGACTCTTATGCAGTAAATGAGGAAGTTGAAGAGCATTTGTCCCATTTAAACTATATCCCAACAACGCTTTTTCTAACAGAAGTCACATATGTTGATTTCTTAGACAGAGTTCATGTCTCTGAGGTCAAATTGCGGTCAAAAGGCTTGTGGGACGTTCCACACCCCTGGCTCAATCTTTTCATACCCAAAAGCAAAATATACGACTTTGCTGAAGGTGTCTTTGGGAAGATGCTAACAGAAACAAGCAACGGTCCAATTCTCATCTACCCATTAAACAAATCAAAGTGGGACAACAGAACTTCTGTAGTTATTAGAAGAAAACAGAGATCAGAAAAGGAAAGTAACTGGCAGAGTGAAGTCAAGCTGATATATGGAAGAATGGAGCATGATGCATGCATTGGTCATGGGGGCATAGAATCATCAAAAACTGAAGTGCTAACAAATGCTTCTCACAGATAA 1497 0.4242 MIRLVLPSTTLISFNRKMRPPPLGLVREHNILFLKGFMILFFSFITIRLNFCVSSIPYSLNSFPLEGHFNFDDVSHAARDFGNRYQYYPTAVLHPKSVSDIAAIIKHIWQMGPSSQLTVAARGHGHSLQGQSQAHGGVVINMESLQFPEMHVYTGNSPYVDVNGGDLWIHILRESLRYGLAPRSWTDYLHLTVGGTLSNAGISGQAFRHGPQISNVRQLEIVTGKGEVVNCSEEQNGELFHSVLGGLGQFGIITRARIVLEPAPSKVKWIRLLYADFTAFTRDQEKLISSESKFDYIEGFVIINRTGLLNNWRSSFKPQDPVQASQFKSDGITLFCLELAKYFNLKDSYAVNEEVEEHLSHLNYIPTTLFLTEVTYVDFLDRVHVSEVKLRSKGLWDVPHPWLNLFIPKSKIYDFAEGVFGKMLTETSNGPILIYPLNKSKWDNRTSVVIRRKQRSEKESNWQSEVKLIYGRMEHDACIGHGGIESSKTEVLTNASHR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1342 498 SUPERFAMILY FAD-binding/transporter-associated domain-like 68 262 IPR036318 GO:0050660
Lele29g1342 498 Gene3D - 73 141 IPR016167 -
Lele29g1342 498 PANTHER GULONOLACTONE OXIDASE 37 454 - -
Lele29g1342 498 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 89 124 IPR006093 GO:0016491
Lele29g1342 498 Gene3D - 266 453 IPR016170 -
Lele29g1342 498 Pfam FAD binding domain 89 232 IPR006094 GO:0050660
Lele29g1342 498 Gene3D - 142 265 IPR016169 -
Lele29g1342 498 SUPERFAMILY FAD-linked oxidases, C-terminal domain 264 449 IPR016164 GO:0003824|GO:0050660
Lele29g1342 498 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 264 451 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lele29g1342 498 ProSiteProfiles PCMH-type FAD-binding domain profile. 85 263 IPR016166 GO:0071949
Lele29g1342 498 FunFam Cytokinin dehydrogenase 1 140 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1342 Lele-ChrLele29 20068805 20073500 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1342 29 20068805 20073500 Lele31g0235 31 2390397 2392570 hybridization
Lele29g1342 29 20068805 20073500 Lele32g1179 32 12151809 12155232 hybridization