Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0743 ATGGTAGCCCCATTTCACATGCAATCTAGTGAAATGAATTATCTCTTGACGCAATTTTCCCTGGATGTCTCTGCTGTTATTAGTGATGTGATTGACGTTGACAATGATGAGGACTCTGCTGATCTAGTGTTCATTGGTGAAAAAGTTGGTGGAAGCAACAAGGGAAAGGAATTGTCTGGTGAACATTTTGGACCAGCTAGTGGGATTGAGTCCTCCAGTGATTATGCTTCAGTATTGCATAACGAAATCGATGTTGATGGTCACATTTCTGATTTATCAAATGATGATGACGACTACAATGATCCTTTTGCTGAAGATTTCATGGATTTCGATCAGTACGCCAGGTTACAGGCACAGTTTGACCATGTGGATATACCTGCTGGAATTGAGGCACCTATTCCCTGGATGTCAAAGTTTGGTCTGAAATCTGAAAGTAGTTCTTCGAATCCTTGGGGTAGTGTGCTGTTAGATGCTAAAAGTTCTCATGTGACAGACTTATCTCACCTTTCCTGGGCAATAGAGTCTTCTGACCTTATCCAAGAAACTCCAGTTTGTAGTTCTAGTTCACTAACAAAAGATGTTGCTGTTAATCCTCCTTCTCAAAAGTTGTCTTCTCAGTTACATACTGAAGCTGCTCCTCGTAAAAAGCCATCAACTTTTTCTCAACTTGATGGGCTTGAGCAGAACTTGAATCTAGCACCAGAGGTAGATTCATCCAAACCTCATGGGTTCAAGGGACCTTTCGGTCGTGAGAAGAAGCTTTCTATTTTAGGTGACTATCATAATGATGCTTTAGCACACAAGTCAGAGTCCTTGAAGCTGCCACCTGGAGGTGAACCCCCTCATTGGGGGAAAGCTAAAAGTGCACAAAAGGCACATGGCAAAGATGTTCTATTCCATCCAAAATTCTTTCCACCTTTTGAAGAGTCACACCATTTTCCTGGATTGGAATCAGCAAACTCTAATATGTGGAAGAATCCTCCTAACCTGCCTTTTACAGATCATTCAGATAATTTAGATCTTTATTATCCATTTGATCCTCTTGATGCCCCTCTTCCACCAATGTTTGGTGATACTTGGTTTCACAATTATGCCCGTGATGAAAATAATGAAACCACTGCTAACATCCTGGTTGTTACAATACCTGATGAAGACAGGGATGAAATCTTGAGGAAATTCCAAGAGTTTAAACAGTTTGACACAGTTGATGACGCTTCAGACCATTACTATAATCGCAAGAGTTATTCCTTGAAGCAGAATTCGAAGAATTGGTCTAAGAAAATTCAGGAAGAGTGGAGGATTCTGGAGAAGGATTTGCCTCGTGAGTGTATTTTAAGTGGGTCTGAAGAAGTGTTAGTAATAGCTGTAATGTTGTATTACGGAATACATAGTGTGCAACCTTTTACTATATTCTTTGCAAGATCTCTCACTGTTTGTTTGTTTGTCTCATTGATTTTGTCAGATTCAATATTTGTTAGAGCTTATGAATCAAGGATGGATATTTTGAGAGCTGTAATTATTGGAGCGGAGGGAACTCCTTATCATGATGGTCTCTTCTTTTTTGATGTTTTTTTACCGAGTCGCTACCCTGATGTGCCACCAGAAGTCCACTACCACTCTGGTGGTGTTAGGATCAACCCAAATTTGTATGAATGCGGCAAAGTATGTCTGAGTCTGCTTAATACTTGGTCTGGCAATAAGAATGAGAAGTGGCTTCCTGGTGTTTCAACAATTCTACAGGTTCTTGTTTCTATACAAGGTTTAGTCTTGAATGCAAAGCCTTATTTTAATGAGCCTATGTATGCCCACATGAGTGGTTCTACCACTGGCGAACTGAGGTCCCTGCAGTATAATGAGGATGCATTTATTCTATCGTTGAAGACAATGACGTACGTGATGAAAAAGCCTCCCAAGCATTTTGAGGACTTCGTTGCAGGGCATTTCTGCAACCAGGCTCGCAATATCTTGGTGGCGTGTAAGGCATACATGGAAGGTGCTCAAGTTGGCTTTTTGGTGAAAGGTGGGGTGCAGGATGTTGACGCGGGTGACTGGAGCTGCTCGAAGCAGTTTAAGGATAATACTTTAGCGGTATTAGTGAATAGGCTCGTCAGAGAATTTTCCAAAGTTGGAGCTAAGGACTGTGAGAAATTCTTGCCACAGTCGGCGACTACAACCGGGAACAATCTGGCAGGTCGTAGCCCTGATGCCGTTGCTGATGTCACAGTACAGGAGGCGACTTCTATTGTATATATACTCTATTCTTCTGCTTCTGCATCTGCATCTGCATCATCGTCTGCTTCACCTTGA 2307 0.417 MVAPFHMQSSEMNYLLTQFSLDVSAVISDVIDVDNDEDSADLVFIGEKVGGSNKGKELSGEHFGPASGIESSSDYASVLHNEIDVDGHISDLSNDDDDYNDPFAEDFMDFDQYARLQAQFDHVDIPAGIEAPIPWMSKFGLKSESSSSNPWGSVLLDAKSSHVTDLSHLSWAIESSDLIQETPVCSSSSLTKDVAVNPPSQKLSSQLHTEAAPRKKPSTFSQLDGLEQNLNLAPEVDSSKPHGFKGPFGREKKLSILGDYHNDALAHKSESLKLPPGGEPPHWGKAKSAQKAHGKDVLFHPKFFPPFEESHHFPGLESANSNMWKNPPNLPFTDHSDNLDLYYPFDPLDAPLPPMFGDTWFHNYARDENNETTANILVVTIPDEDRDEILRKFQEFKQFDTVDDASDHYYNRKSYSLKQNSKNWSKKIQEEWRILEKDLPRECILSGSEEVLVIAVMLYYGIHSVQPFTIFFARSLTVCLFVSLILSDSIFVRAYESRMDILRAVIIGAEGTPYHDGLFFFDVFLPSRYPDVPPEVHYHSGGVRINPNLYECGKVCLSLLNTWSGNKNEKWLPGVSTILQVLVSIQGLVLNAKPYFNEPMYAHMSGSTTGELRSLQYNEDAFILSLKTMTYVMKKPPKHFEDFVAGHFCNQARNILVACKAYMEGAQVGFLVKGGVQDVDAGDWSCSKQFKDNTLAVLVNRLVREFSKVGAKDCEKFLPQSATTTGNNLAGRSPDAVADVTVQEATSIVYILYSSASASASASSSASP 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0743 768 CDD UBCc 488 604 IPR000608 -
Lele32g0743 768 Gene3D Ubiquitin Conjugating Enzyme 383 709 IPR016135 -
Lele32g0743 768 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 467 630 IPR000608 -
Lele32g0743 768 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 110 713 - -
Lele32g0743 768 MobiDBLite consensus disorder prediction 196 220 - -
Lele32g0743 768 Pfam Ubiquitin-conjugating enzyme 496 605 IPR000608 -
Lele32g0743 768 SUPERFAMILY UBC-like 487 639 IPR016135 -
Lele32g0743 768 SMART ubc_7 474 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0743 Lele-ChrLele32 4791175 4799350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0743 380 721 Miscellaneous Gene Families AT2G33770 42.151 2.17e-76 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0768 29 4965471 4970632 Lele32g0743 32 4791175 4799350 hybridization
Lele30g0636 30 11041610 11055690 Lele32g0743 32 4791175 4799350 hybridization