Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0620 ATGGCTTTGGTTGATATAACCAAATCCTGCATCGATTCGATCAGACAGATACACGAGCATATTGAAGGTGCTATTGTTTACTTAGATGCTGGGTGCACAGAGAGTTTCCAGTTTATTGGTGCATATCCCGTTCTTCTGGATGTTGGAGCCCGAGCTATCTGCAGTTTAGAAAACATGCGTTCACTTGATGCGGTGGTTGATTGGAACTCATTTTCTACTCCTGCAAGGAAACTCGTCGTAATCACATCATGTTTACTAAGCGATGCACATCGGTATATTTTACGATGCCTGAGCACACATCAAGTTGTCCGTCATTGTACTATATTTACATCAATCTCAGAGACAGCTCATTCAACATTTCCTGATTCACCTCTGGGACCAGATGCATATCAAGAATATGAAGCCTTGCTGGTTCAAGATTATGAAGAACTAGTTAAGAAATCTGGGACAAATTCTCGTGGAAAGCTTGAAGATGAAGGGCATTCACACTCTCCTTCCAGCAGAAAGGGTGCTCTTCATCTTGAAGTTAGTTCAAGTGCAAATTTATGTGAAGATAATCCATTAGACTACATTGAAGATGCAGTGCCCAGATTGGTTGTTTCTGTTAATCATTTTCCTTTGATTTTATGTCCCCTTTCACCTAGAGTATTTGTTTTGCCTTCAGAAGGGTCGGTAGCTGAAGCATCCTTATCAGCCGAACATGAATATTCCATTAGTCCTGGATTGCCTCCCTTAAGTACTGGAGTGCTCTCTGATGCTGATGATGTGCCTCCAGGGGCAACTCTTACTGCACACTTTCTCTACCACTTGGCATCAAAGATGGACTTGAAAATGGAAATTTTCTCCCTTGGTGATATTTCAAAAGTAGTTGGGAAGATTCTGACGGACATGTCAAGTCTGTATGATGTAGGTCGCCGTAAACGACCAGCAGGGCTTTTACTCGTTGATCGCACACTTGATCTTCTTACTCCTTGCTGTCATGGGGACTCATTAGTTGATTGTATGTTTTCATGTCTGCCCCGTAGGAGCAGAATGACTTCATACCCCCAAGTTAAGAGTTCAGGAACCCAACCCAAGCATGGCACTTCCTACCTGCAACGTGCTCCCTTGGATGTCCAGATACCGCTTGGGAAGATCCTCTATGAAGAAGATTGCAAAGTGGATAATTTTCGTCTACTAGAAAGTGTTGAAGCTTTTCTTTGTGGTTGGAATTCTAGCTCCTCTGATTCTCAGATGTCTGATTTAATTAGTTTTAGTCAGAAAATTCATGAAAAGTCTCTAAATTCTGACGGAGAGATGCTTACTGGGTCCTTAATCTCCTCTGAAAATTTCCGTGGAACACCATGCTTAGAAGCTTTACTAGATAGAAGAACAAGAGATGGAGCCCTACTTGTAAAGAAATGGTTACAGGAAACTCTGCGCAGGGATAATGTAACTTTGAATGTGAAATCTCGTCCCGGTCATGTTACAAGACAGGAGTTGCAAGCAATGATCAAAGCATTGGGCAGGGGCCAATCATCTTTAGTGAGAAATAGAGGAATTATTCAATTAGCTTCTGCCACCCTATTAACCCTTGAGGAATCAACTTCCGCCAAATGGGACGCATTTAGTAGTGCTGAGAAGATTCTAAGTGTAAGTTCTGGAGAAACCAGTCAAAGTCTTGCTGCTCAAATTGGCGATCTCATTAATAAGAGTGCTTTATTGGGATCACATGGAAATAAAGTAAAAAAGGAGCTCCCTCAGGGGGTACTCTCGTTGCAAGATGCTTTGTTGTTGATGATTGTTGCATATATATTGGCTGGGGAGAATTTCCCCACATCGGGGTCTGATGGCCCATTCTCCTGGCAAGAGGAACATATGTTAAAAGAGATTGTTGTAGACGCCATTCTTGAAAATCCATCAGTAGCCAAACTCAAGTTTCTAGATGGACTAAGGGAAGAGCTTGAAGCTAATCTAACTAAGTCAAAATCAGAAGAAACAACCAAAGAATCTCCAAATCTAGACATTGATGATTTTGATGATGATCAATGGGGAAAATGGGGTGATGAAGAAGCTAAAGATGATAATAAAGACGAGCAAGTGTATGATGACATGCAGCTGAAGTTGGAGTTGCGGGATAGGGTGGATCGCCTTTTTAAATTCCTTCACAAGTTGTCCGATTTGAAAAAAAAAAATATACCAACGAGGGATGGATCATTGACCATGGAAACTAGTTTTGGCGATGAGGCTTCCATGGGAAAAGGATTACTCTATAAGCTGCTAACAAGGGTGTTGGGCAAGTTTGATGTGCAGGGGTTAGAATACCATTCTTCCACTGTGGGGCGGCTTTTTAAGAGTGGATTTGGAAGATTTGGCCTTGGTCAGGCAAAGCCCAGTCTTGCCGATCAAAATGTCATTTTGGTGTTTGTGATTGGGGGAATCAATGGAGTTGAGGTGCGTGAAGCTCATGAAGCCTTGTCTGAGAGCGGAAGACCTGATATTGAATTGCTTGTTGGTGGAACAACGCTACTCACTCCCGACGACATGCTTGATTTACTATTGGGGGAGTCCAGTTACGTTAGATCCTTTTAG 2571 0.4228 MALVDITKSCIDSIRQIHEHIEGAIVYLDAGCTESFQFIGAYPVLLDVGARAICSLENMRSLDAVVDWNSFSTPARKLVVITSCLLSDAHRYILRCLSTHQVVRHCTIFTSISETAHSTFPDSPLGPDAYQEYEALLVQDYEELVKKSGTNSRGKLEDEGHSHSPSSRKGALHLEVSSSANLCEDNPLDYIEDAVPRLVVSVNHFPLILCPLSPRVFVLPSEGSVAEASLSAEHEYSISPGLPPLSTGVLSDADDVPPGATLTAHFLYHLASKMDLKMEIFSLGDISKVVGKILTDMSSLYDVGRRKRPAGLLLVDRTLDLLTPCCHGDSLVDCMFSCLPRRSRMTSYPQVKSSGTQPKHGTSYLQRAPLDVQIPLGKILYEEDCKVDNFRLLESVEAFLCGWNSSSSDSQMSDLISFSQKIHEKSLNSDGEMLTGSLISSENFRGTPCLEALLDRRTRDGALLVKKWLQETLRRDNVTLNVKSRPGHVTRQELQAMIKALGRGQSSLVRNRGIIQLASATLLTLEESTSAKWDAFSSAEKILSVSSGETSQSLAAQIGDLINKSALLGSHGNKVKKELPQGVLSLQDALLLMIVAYILAGENFPTSGSDGPFSWQEEHMLKEIVVDAILENPSVAKLKFLDGLREELEANLTKSKSEETTKESPNLDIDDFDDDQWGKWGDEEAKDDNKDEQVYDDMQLKLELRDRVDRLFKFLHKLSDLKKKNIPTRDGSLTMETSFGDEASMGKGLLYKLLTRVLGKFDVQGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGVEVREAHEALSESGRPDIELLVGGTTLLTPDDMLDLLLGESSYVRSF 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0620 856 Gene3D - 693 848 IPR027482 -
Lele32g0620 856 SUPERFAMILY Sec1/munc18-like (SM) proteins 185 328 IPR036045 -
Lele32g0620 856 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 14 846 IPR001619 GO:0016192
Lele32g0620 856 MobiDBLite consensus disorder prediction 149 168 - -
Lele32g0620 856 Pfam Sec1 family 528 844 IPR001619 GO:0016192
Lele32g0620 856 SUPERFAMILY Sec1/munc18-like (SM) proteins 767 848 IPR036045 -
Lele32g0620 856 MobiDBLite consensus disorder prediction 149 170 - -
Lele32g0620 856 MobiDBLite consensus disorder prediction 652 667 - -
Lele32g0620 856 Coils Coil 638 658 - -
Lele32g0620 856 MobiDBLite consensus disorder prediction 652 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0620 Lele-ChrLele32 3875570 3880302 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0636 29 3933004 3938367 Lele32g0620 32 3875570 3880302 hybridization
Lele30g0761 30 11986164 11990863 Lele32g0620 32 3875570 3880302 hybridization