Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0761 ATGGCTTTGGTTGATATAACCAAATCCTGCATCGATTCCATCAGACAGATACAAGAGCATATTGAAAGTGCTATTGTTTACTTAGATGCTGGGTGTACAGAGAGTTTCCAGTTTATTGGTGCATATCCCGTGCTTCTGGATGTTGGAGCCCGAGCTATCTGCAGTTTAGAAAACATGCGTTCACTTGATGCGGTGGTTGATTGGAACTCATTTTGTACTCCTGCAAGGAAACTTGTCGTAATCACATCATGTTTACTAAGCGATGCACATTGGTATATTTTACGATGCCTGAGCACACATCAAGTTGTCCGTCATTGTACTATATTTACATCAATCTCAGAGACAGCTCATTCAACATTTCCTGATTCACCTCTGGGACCAGATGCATATCAAGAATATGAAGCCTTGCTGGTTCAAGATTATGAAGAACTAGTTAAGAAATCTGGGACAAATTCTCGTGGAAAGCTTGAAGATGAAGGGCATTCACACTCTCCTTCCAGCGGAAAGGATGCTCTTCATCTTGAAGTTAGTTCAAGTGCAAATTTATGTGAAGATAATCCATTAGACTACATTGAAGATGCAGTGCCAAGATTGGTTGTTTCTGTTAATCATTTTCCTTTGATTTTATGTCCCCTTTCACCGAGAGTATTTGTTTTACCTTCAGAAGGGTTGGTAGCTGAAGCATCCTTATCAGCCGAGCATGAAGATTCCATTAGTCCTGGATTGCCTCCCATAAGTACTGGAGTGCTCTCTGATGCTGATGATGTGCCTCCAGGGGCAACTCTTACTGCACACTTTCTCTACCACTTGGCATCAAAGATGGACTTGAAAATGGAAATTTTCTCCCTTGGTGATATGTCAAAAGTAGTTGGGAAGATTCTGACAGACATGTCAAGTCTGTATGATGTAGGTCGCCATAAACGACCAGCAGGGCTTTTACTAATTGATCGCACACTTGATCTTCTTACTCCTTGCTGTCATGGGGACTCATTAGTTGATTGTATATTTTCATGTCTGCCCCGTAGGAGCAGAACAACTTCATACCCCCAAGTTAAGAGTTCAGGAACCCAACCCAAGCATGGCACTTCCTACCTGCAACGCTCTCCCTTGGATGTCCAGATACCGCTTGGGAAGATCCTCTATGAAGAAGATTGCGAAGTGGATAATTTTCGTCTACTAGAAAGTGTTGAAGCTTTTCTTTGTGGTTGGAATTCTAGCTCCTCTGATTCTCAGATGTCTGATTTAATTAGTTTTAGTCAGAAAATTCATGAAAAGTCTCTAAATTCTGATGGGGAGATGCTCACTGGGTCCCTAATCTCCTCTGAAAATTTCCGTGGAACACCATTCTTAGAAGCTTTACTAGATCGAAGAACAAGAGATGGAGCCCTACTTGTAAAGAAATGGTTACAGGAAACTCTGCGCAGGGATAATGTAACTTTGAATGTGAAATCTCGTCCTGGTCATGTTACAAGACAGGAGTTGCAAGCAATGATCAAAGCATTGGGCAGGGGCCAATCATCTTTAGTGAGAAACAGAGGAATTATTCAATTAGCTTCTGCCACCCAATTAACCCTTGAGGAATCAACTTCTGCCAAATGGGATGCATTTAGTAGTGCTGAGAAGATTCTAAGTGTAAGTTCTGGAGAAACCAGTCAAAGTCTTGCTGCTCAAATTGGCGATCTCATTAATAAGAGTGCTTTATTGGGATCACATGGAAATAAAGTAAAAAAGGAGCTCTCTCAGGGGGTACTTTCGGTGCAAGATGCTTTGTTGTTGATGATTGTTGGATATATATTGGCTGGGGAGAATTTCCCCACATCGGGGTCTGATGGTCCATTCTCCTGGCAAGAGGAACATATGTTAAAAGAGGCTGTTGTAGATGCCATTCTTGAAAATCCATCAGTAGCCAAACTCAAGTTTCTAGATGGACTAAGGGAAGAGCTTGAAGCTAATCTAAATCTAACTAAGTCAAAATCAGAAGAAACAACCAAAGAATCTCCAAAGCTAGACATTGATGATTTTGATAATGATCAATGGGGAAAATGGGGTGATGAAGAAGCTGAAGATGATAATAAAAACGAGCAAGGGTATGATGACATGCAGCTGAAGTTGGAGTTGCGTGATAGGGTAGATCACCTTTTTAAATTCCTTCACAAGTTGTCCGATTTGAAAAGAAAAAATATACCAACGAGGGATGGATCATTGACCATGGAAACTAATTTTGGCGATGAGGCTTCCATGGGAAATGGATTACTCTATAAGCTTCTAACAAGGGTGTTGGGCAAGTTTGATGTGCCAGGGTTAGAATACCATTCTTCCACTTTGGGGCGGCTTTTTAAGAGTGGATTTGGAAGATTTGGCCTTGGTCAGGCAAAGCCCAGTCTTGCTGATCAAAATGTCATTTTGGTGTTTGTGATTGGGGGAATCAATGGAGTTGAGGTGCGTGAAGCTCATGAAGCCTTGTGTGAAAGCGGAAGACCTGATATTGAATTGCTTGTTGGTGGAACAACGCTACTCACTCCCGATGACATGCTTGATTTACTATTGGGGGAGTCCAGTTACGTTAGATCCTTTCAGCAATAG 2583 0.4166 MALVDITKSCIDSIRQIQEHIESAIVYLDAGCTESFQFIGAYPVLLDVGARAICSLENMRSLDAVVDWNSFCTPARKLVVITSCLLSDAHWYILRCLSTHQVVRHCTIFTSISETAHSTFPDSPLGPDAYQEYEALLVQDYEELVKKSGTNSRGKLEDEGHSHSPSSGKDALHLEVSSSANLCEDNPLDYIEDAVPRLVVSVNHFPLILCPLSPRVFVLPSEGLVAEASLSAEHEDSISPGLPPISTGVLSDADDVPPGATLTAHFLYHLASKMDLKMEIFSLGDMSKVVGKILTDMSSLYDVGRHKRPAGLLLIDRTLDLLTPCCHGDSLVDCIFSCLPRRSRTTSYPQVKSSGTQPKHGTSYLQRSPLDVQIPLGKILYEEDCEVDNFRLLESVEAFLCGWNSSSSDSQMSDLISFSQKIHEKSLNSDGEMLTGSLISSENFRGTPFLEALLDRRTRDGALLVKKWLQETLRRDNVTLNVKSRPGHVTRQELQAMIKALGRGQSSLVRNRGIIQLASATQLTLEESTSAKWDAFSSAEKILSVSSGETSQSLAAQIGDLINKSALLGSHGNKVKKELSQGVLSVQDALLLMIVGYILAGENFPTSGSDGPFSWQEEHMLKEAVVDAILENPSVAKLKFLDGLREELEANLNLTKSKSEETTKESPKLDIDDFDNDQWGKWGDEEAEDDNKNEQGYDDMQLKLELRDRVDHLFKFLHKLSDLKRKNIPTRDGSLTMETNFGDEASMGNGLLYKLLTRVLGKFDVPGLEYHSSTLGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGVEVREAHEALCESGRPDIELLVGGTTLLTPDDMLDLLLGESSYVRSFQQ 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0761 860 SUPERFAMILY Sec1/munc18-like (SM) proteins 776 850 IPR036045 -
Lele30g0761 860 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 14 848 IPR001619 GO:0016192
Lele30g0761 860 MobiDBLite consensus disorder prediction 149 168 - -
Lele30g0761 860 MobiDBLite consensus disorder prediction 149 170 - -
Lele30g0761 860 SUPERFAMILY Sec1/munc18-like (SM) proteins 187 328 IPR036045 -
Lele30g0761 860 Coils Coil 638 665 - -
Lele30g0761 860 Pfam Sec1 family 525 846 IPR001619 GO:0016192
Lele30g0761 860 Gene3D - 716 850 IPR027482 -
Lele30g0761 860 MobiDBLite consensus disorder prediction 345 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0761 Lele-ChrLele30 11986164 11990863 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0761 30 11986164 11990863 Lele31g0904 31 16452907 16458402 hybridization
Lele30g0761 30 11986164 11990863 Lele32g0620 32 3875570 3880302 hybridization