Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0505 ATGAGTCGCTACGATTCGAATCCTTTCGAAGAAGAAGAGGTCAATCCCTTCGCGGATGGAGCAGGTAAAGGAAGAGGGCAATCAACCTATAGTGGAGGTGCATTTTATATGACTAATTCCACAACTGTCCCTTCTGCAACATCTAAGCTCTCACCCCTTCCTCCTGAGCGTTATGATCGTGGGGCAACTATTGATATTCCTCTAGATTCCTCAAGGGATGTAAAAGCAAGAGAGAAGGAGCTCCAAGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCCAGAGCTGGTATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTCCCTATCATTCATCATGACATTGGAAAGGAAATACCAATACATCTGCAGAAGGTTCAGTATGTTGCATTCACAACATTTTTAGGTTTGGTTCTGTGCCTTACGTGGAATATTGTGGCAGTTACTACCGCTTGGATCAAAGGGGAAGGTCCTACAATATGGTTTCTTGCTATAATCTACTTCATTTCAGGTGTACCAGGAGGCTACGTGTTGTGGTATCGCCCTCTTTATCGGGCTATCAGGACTGACAGTGCTCTGAAGTTTGGCTGGTTTTTCTTGTTTTACCTGTTGCACATTGGCTTTTGCATATTCGCTTCAGTTGCTCCACCAATTATCTTCAGAGGAAAATCTCTCACAGGTATCTTGCCTGCTATAGATTTGCTGGGTGACCACGCACTGGTTGGGATATTCTACTTTATTGGGTTTGCGTTCTTCTGCCTTGAGAGTCTGCTGAGCGTCTGGGTTATTCAGCAAGTATACATGTACTTCCGTGGCAGCGGCAAGGCTGCAGAGATGAAGCAACAAGCCGGGAGGAGCACCATGATGGCAGCCCTATGA 909 0.4499 MSRYDSNPFEEEEVNPFADGAGKGRGQSTYSGGAFYMTNSTTVPSATSKLSPLPPERYDRGATIDIPLDSSRDVKAREKELQAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIGKEIPIHLQKVQYVAFTTFLGLVLCLTWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGGYVLWYRPLYRAIRTDSALKFGWFFLFYLLHIGFCIFASVAPPIIFRGKSLTGILPAIDLLGDHALVGIFYFIGFAFFCLESLLSVWVIQQVYMYFRGSGKAAEMKQQAGRSTMMAAL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0505 302 MobiDBLite consensus disorder prediction 1 62 - -
Lele32g0505 302 MobiDBLite consensus disorder prediction 31 49 - -
Lele32g0505 302 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 299 IPR007273 GO:0015031|GO:0016020
Lele32g0505 302 Pfam SCAMP family 111 282 IPR007273 GO:0015031|GO:0016020
Lele32g0505 302 Coils Coil 71 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0505 Lele-ChrLele32 3157705 3162352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0505 2 274 Miscellaneous Gene Families AT1G61250 70.144 1.03e-143 404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0528 29 3195136 3199820 Lele32g0505 32 3157705 3162352 hybridization
Lele30g0884 30 12741226 12745819 Lele32g0505 32 3157705 3162352 hybridization