Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0884 ATGAGTCGCTACGATTCGAATCCTTTCGAAGAAGAAGAGGTCAATCCCTTCTCGGATGGAGCAGGTAAAGGAAAAGGGCAATCAGCCTATAGTGGAGGTGCATTTTATATGACTAACTCCACAACTGTCCCTTCTGCAACATCTAAGCTCTCGCCCCTTCCTCCTGAGCGTTATGATCGTGGGGCAACTATTGATATTCCTCTAGATTCCTCAAAGGATGTAAAAGCAAGAGAGAAGGAGCTCCAAGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCCCGAGCTGGTATAGTTATAGAGGAGAAAAATTGGCCACCTTTTTTCCCTATCATTCATCATGACATTGGAAAGGAAATACCAATACATCTGCAGAAGGTTCAGTATGTTGCATTCACAACATTTTTAGGTTTGGTTCTGTGCCTTACGTGGAATATTGTGGCAGTTACTACTGCTTGGATCAAAGGGGAAGGTCCTACGATATGGTTTCTTGCTATAATCTACTTCATTTCAGGTGTACCAGGAGGCTACGTGTTGTGGTATCGCCCTCTTTATCGGGCTATGAGGACTGACAGTGCTCTGAAGTTTGGATGGTTTTTCTTGTTTTACCTGTTGCACATTGGCTTTTGCATATTCGCTTCAGTTGCTCCACCAATTATCTTCAGAGGAAAATCTCTCACAGGTATCTTGCCTGCTATAGATTTGCTGGGTGACCACGCACTGGTTGGGATATTCTACTTTATTGGGTTTGCGTTCTTCTGCCTTGAGAGTCTGCTGAGCGTCTGGGTTATTCAGCAAGTATACATGTACTTCCGTGGCAGCGGCAAGGCTGCAGAGATGAAGCAACAAGCTGCGAGGAGCACCATGATGGCAGCTCTATGA 909 0.4477 MSRYDSNPFEEEEVNPFSDGAGKGKGQSAYSGGAFYMTNSTTVPSATSKLSPLPPERYDRGATIDIPLDSSKDVKAREKELQAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIGKEIPIHLQKVQYVAFTTFLGLVLCLTWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGGYVLWYRPLYRAMRTDSALKFGWFFLFYLLHIGFCIFASVAPPIIFRGKSLTGILPAIDLLGDHALVGIFYFIGFAFFCLESLLSVWVIQQVYMYFRGSGKAAEMKQQAARSTMMAAL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0884 302 Pfam SCAMP family 111 282 IPR007273 GO:0015031|GO:0016020
Lele30g0884 302 MobiDBLite consensus disorder prediction 1 57 - -
Lele30g0884 302 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 299 IPR007273 GO:0015031|GO:0016020
Lele30g0884 302 MobiDBLite consensus disorder prediction 32 49 - -
Lele30g0884 302 Coils Coil 71 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0884 Lele-ChrLele30 12741226 12745819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0884 64 302 Miscellaneous Gene Families AT2G20840 83.682 1.39e-144 404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0884 30 12741226 12745819 Lele31g1018 31 17203358 17208069 hybridization
Lele30g0884 30 12741226 12745819 Lele32g0505 32 3157705 3162352 hybridization