Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0528 ATGAGTCGCTACGATTCGAATCCTTTCGAAGAAGAAGAGGTTAATCCCTTCGCGGTAAGTTCGTGGCTAAATTTACGCTTTATAGGCGATGCTTCCTGTACCTGTGGGATGCTCGTTTGTCTGCTGACAAATCCAGAAAAACGGAAGTATAAATCTTATGGAGAATTGGAACAAATTGTCTTTATCCTGGTTAATAACTCCGCAACTGTCCCTTCTGCAACATCTAAGCTCTCACCCCTTCCTCCTGAGCGTTATGATCGTGGGGCAACTATTGATATTGCTCTAGATTCCTCAAAGGATGTAAAAGCAAGAGAGAAGGAGCTCCAAGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCCCGAGCCGGTATAGTTATAGAGGAGAAAAATTGGCCACCGTTTTTCCCTATCATTCATCATGACATTGGAAAGGAAATACCAATACATCTGCAGAAGGTTCAGTATGTTGCATTCACAACATTTTTAGGTTTGGTTCTGTGCCTTACATGGAATATTGTGGCAGTTACTACTGCTTGGATCAAAGGGGAAGGTCCTACAATATGGTTTCTTGCTATTATCTACTTTATTTCAGGTGTACCTGGAGGCTATGTGTTGTGGTATCGCCCTCTTTATCGGGCTATGAGGACTGACAGTGCTCTGAAGTTCGGCTGGTTTTTCTTGTTTTACCTGTTGCACATTGGCTTTTGCATATTCGCTTCAGTTGCTCCACCAATTATCTTAAGAGGAAAATCTCTCACAGGTATCTTGCCTGCTATAGATTTGCTGGGTGACCACGCTCTGGTTGGGATATTCTACTTTATTGGGTTTGCGTTCTTCTGCCTTGAGTCTCTGCTGAGCGTCTGGGTTATTCAGCAAGTATATATGTACTTCCGTGGCAGCGGCAAGGCTGCAGAGATGAAGCAACAAGCCGCGAGGAGAACCATGATGGCAGCTCTATGA 990 0.4384 MSRYDSNPFEEEEVNPFAVSSWLNLRFIGDASCTCGMLVCLLTNPEKRKYKSYGELEQIVFILVNNSATVPSATSKLSPLPPERYDRGATIDIALDSSKDVKAREKELQAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIGKEIPIHLQKVQYVAFTTFLGLVLCLTWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGGYVLWYRPLYRAMRTDSALKFGWFFLFYLLHIGFCIFASVAPPIILRGKSLTGILPAIDLLGDHALVGIFYFIGFAFFCLESLLSVWVIQQVYMYFRGSGKAAEMKQQAARRTMMAAL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0528 329 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 326 IPR007273 GO:0015031|GO:0016020
Lele29g0528 329 Coils Coil 98 128 - -
Lele29g0528 329 Pfam SCAMP family 138 309 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0528 Lele-ChrLele29 3195136 3199820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0528 91 329 Miscellaneous Gene Families AT2G20840 83.264 7.44e-143 401
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0528 29 3195136 3199820 Lele31g1018 31 17203358 17208069 hybridization
Lele29g0528 29 3195136 3199820 Lele32g0505 32 3157705 3162352 hybridization