Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0503 ATGGCTGATGGAGAGAACAATGATATGGGGGCTGCAGACACCTTCGCTCCGGTGCTGGATGATTGTTTCTTCGACGGGTCGGTTCTAAATCCTGTTGTGTCTAATGGCGTAGGGAAGGTGGAGGAGAGAGCCGAGTGTGAAAATTTGGGAGTTTCGAGTTGTACGGTTGAGCAAGAAATGAGAAACGGTGCTGAACCAATTGCTATGGACTCTACTCTTATTGAGGAATGGATAGGAAGTATTAGTTTAGCTGGCGAGCTTCAAAGTTCTGAGCAGGAAATGAGAAACGGTGTTGAGCCAACTTCTATCGTGGAAGTGGATGGTGAAGTGAGTGAAAAATTGGAGGCTTCGGGTTGTAACAGTAATATTGAGGAAGGGGTGGGAAGTACTCGTTTGGTTAGTGGGCTTGGAAGCTCTGTTATAATTGGAATGAATGATGGGAAGAGTGAGATTAAGGTGGATGAGGATGAGAGTGAAAATTCAGAGTCCGAGAGTGATAATCCATCTTCACCAACATTTGCATCTTCGAGTAGTACCAGTGACAGTGACGATAGTTCTACTAGTGGTGGCTCTAGTGATGATGACGATAGTGAAGATGGTGAGGAAGAGGACCATCAGGAAGAAATGACAAAAAGGATTGAAGTGGAAGTTGAAGAAGGTGAAATAAAAGACTCTGATGGGCAAGAGCTTGAAACTGACAGGGCCGTCAGTGATGATGAAGATGCAGGGGAGGTTTCTTGGGGTGGCATTAATGATGGAGATGATGAAGATGGCACTTCTATGGAAGGGCCCATAAGGTCAAAGAACGAGCTCAAGGATCTTCCTTCTGTTCCCCTGGTAAATGTGACCATAGGACCACACCATCAAATGCTGGCAGTAGGAGTTGTTATGTCGATAATCAGCTCCCAAGTCGTTGTGGAAGGGATGGAGAAGCATGATCCTCTTAATGAGGGTTCCATTCTCTGGATAACTGAAACCCGAAAACCACTAGGGTTGGTTGATGAAATCTTTGGACCTGTCAAAAACCCTTACTATATTGTGAGATACAATTCTGAAAATGAAATCCCCAAGGGTGTCCATGTGGGCACTTCGATCTCTTTTGTTCAGGAATTTGCCGATCATGTGCTTAATAACAAGGATCTTTACAAGAAAGGCTATGATGCTTCCGGTTTGAACGATGAAGAGTTGTCTGATGAAGCAGAGTTTTCCGATGATGAGAAAGAGGCAGAATACAGGAAAATGCAAAAGGTGATGAAGAGAGGTATTAGTGATCAGAATCATGGAAAGCATAAAAACAACAGAAAGAAGGCTTCAAGGAAAAATGGGCCGGCAGCACCTCCCTACCCCATCCCATCTGCTTCTTCAACGCATAATCATCAAAAGTTTCCTCCTCCATTTTCCGGCATCAGACCAGGTCCTTTCGAGGCGGTATCTTCGATCGTACCACCGTTTCCACCTGCAAATCCTGGCCCTAATTTAGCTTCAAACGGAGTTTGGACAAATGGGATATCGCTTATGCAGCCACAAACTGCTCTGCTTCCTAATGGTTTTCCTCCTAATGAAATGTCTTTGTTCCCAGGAAATGCACAAAATCCTTATCAATTGGCAATGACAGTAATCCCATTTCAACAGCAGTTACGCCCCAACCTAGGATCGGTTCCACTTCCAGGAACCAGCTTGCCTGTAGTACAACCCAATATATTTGCACAACCCGTGTTCCCACAGGGTCTTGTTGGTCAAAATCAAAGGACTTTTGGGATGAATGTCCCGCAGATTCAGGCATCTGTAAGTGGTGGTGGTGAACAAGCTTTTTTGCCCTACGGAATGCAAGCAGAGAGAAATCATAATTTTCAGTCGGGTCCTGTGAATCCCCATGCTCCCAATCGATTTAGACCCGGTGGCTCTGTCAGTCGTGGAAGGAAAAACTTTCACCAAAGGGGAAGGAAAGGCTGGCGACCATCAACAAAGTAA 1971 0.4515 MADGENNDMGAADTFAPVLDDCFFDGSVLNPVVSNGVGKVEERAECENLGVSSCTVEQEMRNGAEPIAMDSTLIEEWIGSISLAGELQSSEQEMRNGVEPTSIVEVDGEVSEKLEASGCNSNIEEGVGSTRLVSGLGSSVIIGMNDGKSEIKVDEDESENSESESDNPSSPTFASSSSTSDSDDSSTSGGSSDDDDSEDGEEEDHQEEMTKRIEVEVEEGEIKDSDGQELETDRAVSDDEDAGEVSWGGINDGDDEDGTSMEGPIRSKNELKDLPSVPLVNVTIGPHHQMLAVGVVMSIISSQVVVEGMEKHDPLNEGSILWITETRKPLGLVDEIFGPVKNPYYIVRYNSENEIPKGVHVGTSISFVQEFADHVLNNKDLYKKGYDASGLNDEELSDEAEFSDDEKEAEYRKMQKVMKRGISDQNHGKHKNNRKKASRKNGPAAPPYPIPSASSTHNHQKFPPPFSGIRPGPFEAVSSIVPPFPPANPGPNLASNGVWTNGISLMQPQTALLPNGFPPNEMSLFPGNAQNPYQLAMTVIPFQQQLRPNLGSVPLPGTSLPVVQPNIFAQPVFPQGLVGQNQRTFGMNVPQIQASVSGGGEQAFLPYGMQAERNHNFQSGPVNPHAPNRFRPGGSVSRGRKNFHQRGRKGWRPSTK 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0503 656 MobiDBLite consensus disorder prediction 419 469 - -
Lele32g0503 656 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 87 583 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Lele32g0503 656 SUPERFAMILY Translation proteins 291 359 IPR009000 -
Lele32g0503 656 MobiDBLite consensus disorder prediction 188 204 - -
Lele32g0503 656 MobiDBLite consensus disorder prediction 164 187 - -
Lele32g0503 656 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 262 368 - -
Lele32g0503 656 MobiDBLite consensus disorder prediction 205 219 - -
Lele32g0503 656 MobiDBLite consensus disorder prediction 614 656 - -
Lele32g0503 656 MobiDBLite consensus disorder prediction 147 270 - -
Lele32g0503 656 Gene3D Probable tRNA pseudouridine synthase domain 262 369 IPR038664 -
Lele32g0503 656 MobiDBLite consensus disorder prediction 641 656 - -
Lele32g0503 656 Pfam Gar1/Naf1 RNA binding region 292 371 IPR007504 GO:0001522|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0503 Lele-ChrLele32 3147436 3150028 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0526 29 3186115 3188716 Lele32g0503 32 3147436 3150028 hybridization
Lele30g0887 30 12757065 12759655 Lele32g0503 32 3147436 3150028 hybridization