Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0526 ATGTCTGATCAAGAGAACAATGATATTGGGGCTGCAGACCCCTTCGCTCCAGTGCGCGAGGATTGTTCCTTCGACGGGTCGGATCGAAATCCTGTTGTGTCTCATGGTGTAGGGAAGGTGGAGGAGAGAGCCGGGTGTGAAAATTTGGGGATCTCGAGTTGTACGGTTGAGCAAGAAATGAGAAATGGTGCTGAGCCAATTGCTATGGAATCCACTCTTATTGAGGAATGGATAGGAAGTATTAGTTTAGCTGGCGGGCTTCAAAGTTCTGAGCGGGAAATGAGAAACGGTGCTGAGCCAATTGCTCTGGAATCTACTTCTATCGTGGAGGTGGATGGTGAAGTGCGTGAAAAATTGGAGGTTTCGGGTTGTAACAGTAATACTGAGGAAGGGGTGGGAAGTATTAGTTTGGTTAGTGGGCTTGGAAGCTCTCTTATAATTGGAAAGAATGATGGAAAGAGTGAGATTAAGAAGGATGAGGATGAGAATGAAAGTTCAGAGTCCGAGAGTCATAATCCATCTTCACCAACATCTGCATCTTCTAGTAGTAGCAGTGATAGTGACGATAGTTCTACTAGTGGTGGTTCTAATGATGATGACGATAGTGAGGAAGAGGAACATCAGGAAGAAGAAAAAATGACAGAAAAGATTCAAGTGGAAGTTGAAGAAGGTGAGATAAAAGACTCTAATGGGCAAGAGCTTGGTACTGACAGTGCCGTCAGTGATGATGAGGATGCAGGGGAGGTTTCTTGGAGTGGCATTAATGATGAAGATGATGAAGACGAAACTGCTATGGAAGGACCCATCAGGTCAAAGAACGAGCTCAAGGATCTTCCTTCTGTTCCTCCAGTAAATGTGACCATACAACCTCACCATCAAATGCTGCCAGTAGGAGTTGTTATGTCGATAATCAGCTCCCAAGTCATTGTGGAAGGGATGGAGAAGCATGATCCTCTTAGTGAGGGGTCCATTCTCTGGATAACTGAAACCCGAACGCCACTGGGGTTGGTTGATGAAATCTTTGGTCCTGTCAAAAACCCTTACTATATTGTGAGATACAATTCTGAAAATGAAATCCCCAAGGGGGTCCATGTGGGTACTTCAATCTCTTTTGTTTGGGAATTCGCCGATCATGTACTTAATAACAAGGATCTTTACAAGAAAGGCTATGATGCTTCTGGTTTGAATGATGAAGAGTTGTCGGATGAAGCAGAGTTTTCTGATGATGAGAAAGAGGTGGAATACAGGAAAATGCAAAAAATGAAGAGAGGTATTAGTGATCAGAATCATGGAAAGCATAAGAACAACAAAAAGAAGGCTTCAAGGAAAAATGGCCCGGCAGCACCTCCCTACCCTGTCCCATCTGCTTCTCCAACGCATAATGATCAAAAGTTTCCTCCTCCATTTTCAGGCATCAGACCTGGTCCTTTCAAGGCGGCAGCTTCGACCGTTCCACCATTTCCACCTACAAATCCCAGCCCTAATTTAGCTTCAAACGGAATTTGGACAAATGGGACATCACTTATGCAGCCTCAAACTGCTCTGCTCCCTAATGGATTTCCTCCTAATAACATATCTTTGTTCCCAGGAAATGCACAAAATCCTTATCAATTGCCAATGACAGTAATCCCGTTTCAACAACAGTTAGGCCCCAATCTAGGATCGCTTCCACTTCCGGGAACCAGCTTGCCTGTAGTACAACCCAATATATTTGTACAACCTATGTACCTACAGGGTCTTGTTGGTCAAAATCAAATGACTTTTGGGATGAATTTCCCGCAGATTCAGGCATCTGTGAGTGGTGGTGGTGAACAATCTTTTTTACCCTACGGAATGCAACCAGAAAGAAATCATAATTTTCAGTCAGGTTCTGTGAATCTCCATGCTCCCAGTCAATTTAGACCTGGTGGCTCTGCTAATCGTGGAAGGAAAACCTTTCCCCAAAGGGGAAGGAAAGGCTGGCGACCAACAAAGTAA 1977 0.4426 MSDQENNDIGAADPFAPVREDCSFDGSDRNPVVSHGVGKVEERAGCENLGISSCTVEQEMRNGAEPIAMESTLIEEWIGSISLAGGLQSSEREMRNGAEPIALESTSIVEVDGEVREKLEVSGCNSNTEEGVGSISLVSGLGSSLIIGKNDGKSEIKKDEDENESSESESHNPSSPTSASSSSSSDSDDSSTSGGSNDDDDSEEEEHQEEEKMTEKIQVEVEEGEIKDSNGQELGTDSAVSDDEDAGEVSWSGINDEDDEDETAMEGPIRSKNELKDLPSVPPVNVTIQPHHQMLPVGVVMSIISSQVIVEGMEKHDPLSEGSILWITETRTPLGLVDEIFGPVKNPYYIVRYNSENEIPKGVHVGTSISFVWEFADHVLNNKDLYKKGYDASGLNDEELSDEAEFSDDEKEVEYRKMQKMKRGISDQNHGKHKNNKKKASRKNGPAAPPYPVPSASPTHNDQKFPPPFSGIRPGPFKAAASTVPPFPPTNPSPNLASNGIWTNGTSLMQPQTALLPNGFPPNNISLFPGNAQNPYQLPMTVIPFQQQLGPNLGSLPLPGTSLPVVQPNIFVQPMYLQGLVGQNQMTFGMNFPQIQASVSGGGEQSFLPYGMQPERNHNFQSGSVNLHAPSQFRPGGSANRGRKTFPQRGRKGWRPTK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0526 658 MobiDBLite consensus disorder prediction 144 278 - -
Lele29g0526 658 MobiDBLite consensus disorder prediction 209 230 - -
Lele29g0526 658 Pfam Gar1/Naf1 RNA binding region 295 372 IPR007504 GO:0001522|GO:0042254
Lele29g0526 658 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 266 372 - -
Lele29g0526 658 Gene3D Probable tRNA pseudouridine synthase domain 266 372 IPR038664 -
Lele29g0526 658 SUPERFAMILY Translation proteins 294 363 IPR009000 -
Lele29g0526 658 MobiDBLite consensus disorder prediction 193 208 - -
Lele29g0526 658 Coils Coil 149 169 - -
Lele29g0526 658 MobiDBLite consensus disorder prediction 1 34 - -
Lele29g0526 658 MobiDBLite consensus disorder prediction 238 264 - -
Lele29g0526 658 MobiDBLite consensus disorder prediction 615 633 - -
Lele29g0526 658 MobiDBLite consensus disorder prediction 151 168 - -
Lele29g0526 658 MobiDBLite consensus disorder prediction 419 471 - -
Lele29g0526 658 MobiDBLite consensus disorder prediction 606 658 - -
Lele29g0526 658 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 228 594 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Lele29g0526 658 MobiDBLite consensus disorder prediction 169 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0526 Lele-ChrLele29 3186115 3188716 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0526 29 3186115 3188716 Lele31g1019 31 17215830 17218474 hybridization
Lele29g0526 29 3186115 3188716 Lele32g0503 32 3147436 3150028 hybridization