Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0501 ATGCCTGGTGGTGCCCTGCAACAAGGCAAAGGCATGTCTGCTCTGAGACAACAACGATTATTGAAGATAGTTACTATTGTTTGTGTGGGTGCCAGGCAAATGATTTCAGGGCTTGTCCAGGCCCAAACATTACTCCATGGGAATGAACCATCTCTTGCTCCACCGGACATTAAAGCAAATCTTAACCCCAAGTTAAATCAAGCATCTTTGCATGAAAACCATGTTTTATCGATTCCGAAGCTAATTCTTCTTCATAAAAGTATGAGGAAAAATGCTAATTCTCATTCAGGAAGGTTATTTAGCGATAGGAAATGGATTATACCATTTTTTGCCAGTTTGCTTGTGTCTGTTAGTCTGGTTCTCACAGCTATTCTTGGGGCTCTTAGTTCTTCTAACGTTGGAGAGCAATCAACGTTTGACATTATTTCATTTGCAAGATCAGAGGATTCAAGGGGGTATTTTGTGGAATCGGATTTGGACAGATGGTCGAATACTAATAATAAGGTTCGAAAAATGGAGGAGGCACCTAGGTTTGCTTATCTTATTTCAGGCACGAAAGGTGATAGTCATAGGATGATGAGGACTTTAGAAGCAGTATATCATCCAAGAAATCAATATGTTTTGCATTTGGATCTTGAGGCTCCACCACGCGAGAGATTGGAATTGGCAGGTTCAGTGAAAGCTGATCCTACATTTCGTGAAGTTGAGAATGTTCGTGTTATGTCTCAATCCAATCTGGTCACTTATAAAGGTCCTACTATGATTGCTTGCACCCTTCAAGCTATTGCAATATTATTGAAAGAGAGCTCAGAGTGGGACTGGTTTATAAACCTCAGTGCTTCAGATTATCCTCTTGTCACACAGGATGATTTGCTTCATATTTTTTCTAATCTGTCCAGAGAGCTCAATTTTATTGAACATACCCACATTGCCGGCTGGAAACTTAACCACAGAGCAAGACCGATCATCATTGATCCGGCCCTTTACTTATCAAAGAAATCCGATATCGCATGGACAACTCAGCGAAGAACTCTTCCCACCTCTTTTAAGTTATTTACAGGCTCAGCTTGGGTTGCGCTGACGCGGTCGTTTGTCGAATACTGCATATGGGGATGGGATAACCTTCCAAGAACTATTCTGATGTATTATACAAATTTTATCTCATCTCCAGAGGGCTATTTTCACACTGTCATTTGTAACACTGAGGAGTTCAAACATACAGCTATAAGCCATGATCTTCACTACATAGCTTGGGACACACCGCCAAAGCAGCACCCAAGATCTTTGACTATGAAGGACTTCGACAAAATGGTTCAGAGCAAGGCTCCATTTGCACGGAAGTTCGCGAAGGACGATCCGGTCCTGGACAAGATTGACAAAGAGCTTTTGGGACGCACGCATAGATTTTCTCCTGGAGCATGGTGTATTGGCAACGCAACGGTAGGCGCCGACCCTTGTTCTTTTAATGGAAATGATACTGTGTTCAGGCCAGGCCCTGGTGCTGCGAGGCTGCGTGAATTGTTTCAAACTCTGTTATCTGATGATTTTAAAAGCAAGCAGTGTTCTTGA 1569 0.4238 MPGGALQQGKGMSALRQQRLLKIVTIVCVGARQMISGLVQAQTLLHGNEPSLAPPDIKANLNPKLNQASLHENHVLSIPKLILLHKSMRKNANSHSGRLFSDRKWIIPFFASLLVSVSLVLTAILGALSSSNVGEQSTFDIISFARSEDSRGYFVESDLDRWSNTNNKVRKMEEAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYVLHLDLEAPPRERLELAGSVKADPTFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDLLHIFSNLSRELNFIEHTHIAGWKLNHRARPIIIDPALYLSKKSDIAWTTQRRTLPTSFKLFTGSAWVALTRSFVEYCIWGWDNLPRTILMYYTNFISSPEGYFHTVICNTEEFKHTAISHDLHYIAWDTPPKQHPRSLTMKDFDKMVQSKAPFARKFAKDDPVLDKIDKELLGRTHRFSPGAWCIGNATVGADPCSFNGNDTVFRPGPGAARLRELFQTLLSDDFKSKQCS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0501 522 Pfam Core-2/I-Branching enzyme 178 437 IPR003406 GO:0016020|GO:0016757
Lele32g0501 522 PANTHER GLYCOSYLTRANSFERASE 102 521 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0501 Lele-ChrLele32 3133289 3141065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0501 174 522 Glycosyltransferase AT1G03520 79.370 0.0 618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0524 29 3171899 3175990 Lele32g0501 32 3133289 3141065 hybridization
Lele30g0889 30 12767712 12773376 Lele32g0501 32 3133289 3141065 hybridization