Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0889 ATGGCTGTACTATTGGTGCCAGATTTGTGGGTTCTGCTTCGATTTCGAAAGATTATGAGGAAAAATGCTAATTCTCATTCAGGAAGGCTATTTAGCGATAGGAAATGGATTATACCATTTTTTGCCAGTTTGCTTGTGTCAGTTAGTCTGGTTCTCACAGCTATTCTTGGGGCTCTTAGTTCTTCTAACGTTGGAGAGCAATCAACGTTTGACATTATTTCATTTGCAAGATCAGAGGATTCAAGTGGGTATTTTGTGGAATCGGATTTGGAAAGATGGTCGAGTGCTAATAATAATGTTCGAAAAATGGAGGAGGCACCTAGGTTTGCTTATCTTATTTCAGGCACGAAAGGCGATAGTCATAGGATGATGAGGACTTTAGAAGCAGTATATCATCCAAGAAATCAATATGTTTTGCATTTGGATCTTGAGGCTCCACCACGTGAGAGATTGGAATTGGCAGCTTCAGTGAAAACTGATCCTACATTTCGTGAAGTTGAGAATGTTCGTGTTATGTCTCAATCCAATCTGGTAACTTATAAAGGTCCTACTATGATTGCTTGCACCCTTCAGGCTATTGCAATATTATTGAAAGAGAGCTCAGAGTGGGACTGGTTTATAAACCTCAGTGCTTCTGATTATCCTCTTGTCACACAGGATGATTTGCTTCATATTTTTTCTAATCTGTCCAGAGAGCTCAATTTCATTGAACATACCCACATTGCCGGCTGGAAACTTAACCACAGAGCAAGACCGATCATCATTGATCCGGCCCTTTACTTATCAAAGAAATCCGATATCGCATGGACGACTCAACGAAGAACTCTTCCCACCTCTTTTAAGTTATTTACAGGCTCAGCTTGGGTTGCGCTGACGCGGTCGTTTGTCGAATACTGCATATGGGGATGGGATAACCTTCCAAGAACAATTCTGATGTATTATACAAATTTTATCTCATCTCCAGAGGGCTATTTTCACACTGTCATTTGTAACACTGAGGAGTTCAAACATACAGCTATAAGCCATGATCTTCACTACATAGCTTGGGACACGCCGCCAAAGCAGCACCCAAGATCTTTGACTATGAAGGACTTCGACAAAATGGTTCAGAGCAAGGCTCCGTTTGCACGGAAGTTCGCGAAGGACGATCCAGTCCTGGACAAGATTGACAAAGAGCTTTTGGGACGCACGCATAGATTTTCTCCTGGAGCATGGTGTATTGGCAACTCAACGGGAGGCGCCGACCCTTGTTCTTTTCATGGAAATGATACTGTGTTCAGGCCAGGCCCCGGTGCTAAGAGGCTGCGTGAATTATTTCAAACTCTGTTATCTGATGATTTCAAAAGCAAGCAATGTTCTTGA 1362 0.4236 MAVLLVPDLWVLLRFRKIMRKNANSHSGRLFSDRKWIIPFFASLLVSVSLVLTAILGALSSSNVGEQSTFDIISFARSEDSSGYFVESDLERWSSANNNVRKMEEAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYVLHLDLEAPPRERLELAASVKTDPTFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDLLHIFSNLSRELNFIEHTHIAGWKLNHRARPIIIDPALYLSKKSDIAWTTQRRTLPTSFKLFTGSAWVALTRSFVEYCIWGWDNLPRTILMYYTNFISSPEGYFHTVICNTEEFKHTAISHDLHYIAWDTPPKQHPRSLTMKDFDKMVQSKAPFARKFAKDDPVLDKIDKELLGRTHRFSPGAWCIGNSTGGADPCSFHGNDTVFRPGPGAKRLRELFQTLLSDDFKSKQCS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0889 453 PANTHER GLYCOSYLTRANSFERASE 33 452 IPR044610 GO:0015020
Lele30g0889 453 Pfam Core-2/I-Branching enzyme 109 368 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0889 Lele-ChrLele30 12767712 12773376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0889 105 453 Glycosyltransferase AT1G03520 79.943 0.0 622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0889 30 12767712 12773376 Lele31g1021 31 17229889 17233107 hybridization
Lele30g0889 30 12767712 12773376 Lele32g0501 32 3133289 3141065 hybridization