Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0524 ATGAGGCAAGCGTCAATTATGAGGAAAAATGCAAATTCTCATCCAGGAAGGTTATTTAGCGATAGGAAATGGATTATACCATTTTTTGCCAGTTTGCTTGTATCTGTTAGTCTGTTTCTCACAGCTATTCTTGGGGCGCTTAGTTCTTCTAACGTTGGCGAGCAATCAACGTTTGACATTATTTCTTTCGCAAGATCAGAGGATTCAAGGGGGTATTTTGTGGAATCGGATTTGGAAAGATGGTCGAGTGCAAATAATAAGGTTCTAAAAATGGAGGAGGCACCTAGGTTTGCTTATCTTATTTCAGGCACAAAAGGTGATAGTCATAGGATGATGAGGACTTTAGAAGCAGTATATCACCCGAGAAATCAATATGTTCTGCATTTGGATCTTGAGGCTCCACCACGTGAGAGATTGGAATTGGCAGCTTCAGTGAAAGCTGATCCTACATTTCGTGAAGTGGAGAATGTTCGTGTTATGTCTCAATCCAATCTGGTGACTTATAAAGGTCCTACGATGATTGCTTGCACCCTTCAAGCTATTGCAATATTGTTGAAAGAAAGCTCTGAATGGGACTGTCTAATGCTACGTTCAGGCTATTTTGATAGTCCACCTGCAGACTTCAGAGGAATTTCGTTACTTATATTTTGTGCTGCAAATATGTTCAGATATATTTCAGTAGTAAAATGCTTTTCTAGTTTCCTCGAAAAAGGGGGAAAGCACATGCCTATATCTGAGAACACAAATTCTTTTCATTTTCTTGTTACATGGAATGATTTGCTTCATATTTTTTCTAATCTGTCTAGAGGGCTCAATTTCATCGAACATACCCACATTGCCGGTTGGAAACTCAACCATAGAGCCAGACCGATCATCATCGATCCAGCCCTTTACTTATCGAAGAAATCTGATATCGCATGGACGACTCAGCGACGAACACTTCCCACCTCTTTTAAGTTATTTACAGGTTCGGCTTGGGTTCTGCTGACGCGGTCTTTTGTCGAATACTGCATATGGGGATGGGATAACCTTCCAAGAACAATTCTGATGTATTACACAAATTTCATCTCATCTCCAGAGGGCTATTTTCACACTGTCATTTGTAACACTGAGGAATTCAAACATACAGCTATAAGCCATGATCTTCACTACATAGCGTGGGACACGCCGCCAAAGCAGCACCCGAGATCTTTGACTATGAAGGACTTTGACAAAATGGTTCAGAGCAAGGCTCCGTTTGCACGGAAGTTTGCAAAGGACGATCCGGTCCTGGACAAGATCGACAAAGAGCTTTTGGGACGCACGCATAGATTTTCTCCTGGAGCATGGTGTATTGGCAACTCGACGGAAGGTGCCGCCGACCCTTGTTCTTTTCGTGGCAATGATACCGTGTTCAGGCCAGGCCCTGGTGCTGAGAGGTTGCGTGAATTGTTTCAAGCTCTGCTATCTGATGATTTCAAAAGCAAGCAGTGTTCTTGA 1479 0.4246 MRQASIMRKNANSHPGRLFSDRKWIIPFFASLLVSVSLFLTAILGALSSSNVGEQSTFDIISFARSEDSRGYFVESDLERWSSANNKVLKMEEAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYVLHLDLEAPPRERLELAASVKADPTFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDCLMLRSGYFDSPPADFRGISLLIFCAANMFRYISVVKCFSSFLEKGGKHMPISENTNSFHFLVTWNDLLHIFSNLSRGLNFIEHTHIAGWKLNHRARPIIIDPALYLSKKSDIAWTTQRRTLPTSFKLFTGSAWVLLTRSFVEYCIWGWDNLPRTILMYYTNFISSPEGYFHTVICNTEEFKHTAISHDLHYIAWDTPPKQHPRSLTMKDFDKMVQSKAPFARKFAKDDPVLDKIDKELLGRTHRFSPGAWCIGNSTEGAADPCSFRGNDTVFRPGPGAERLRELFQALLSDDFKSKQCS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0524 492 Pfam Core-2/I-Branching enzyme 254 406 IPR003406 GO:0016020|GO:0016757
Lele29g0524 492 Pfam Core-2/I-Branching enzyme 97 199 IPR003406 GO:0016020|GO:0016757
Lele29g0524 492 PANTHER GLYCOSYLTRANSFERASE 21 491 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0524 Lele-ChrLele29 3171899 3175990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0524 93 492 Glycosyltransferase AT1G03520 67.250 0.0 565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0524 29 3171899 3175990 Lele31g1021 31 17229889 17233107 hybridization
Lele29g0524 29 3171899 3175990 Lele32g0501 32 3133289 3141065 hybridization