Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0487 ATGGCCGCTGTTACCTCTTTGTCCTTCTCCGCATTAACCCAATGCTCTGAAAGAAAGCCAGCTTTCGCTTCCTCTCGCTTCCTCGGATTCAATTCGGAGGCATTACGGTTTCGGACGAATATTTCTTACCATTATGCTGCTATTGGAGCTTCCCATTCCGCTTCTAAGATGATTATTCAATGCATGTCGTCTGCGACAGATGTTCCCACGGTAACTGGGACAAAATCTAATTTCCTCAAGGCATATAAACGACCGATCCCTAGTATCTACAACACTGTGCTGCAGGAACTCATTGTTCAGCAGCATTTAATGAGATACAAGAGATCATACCGTTATGACCCTGTATTTGCACTTGGTTTTGTCACTGTGTATGATCAACTCATGGACGGGTATCCTAGCGATGAAGATCGAGATGCCATCTTCCAAGCATATATCAGGGCATTGAAGGAAGAGCCAGAACAATATAGAATAGATGCAAAGAAGTTGGAAGAGTGGGCCAGGTCTCAGAACCCAAATTCCCTAGTTGAGTTTTCTTCCAGAGAAGGAGAGGTGGAGGGAATATTGAAGGATATTGCAGAAAGAGCAGGTGGAAAGGGGGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTATTTCGACTTCTTGAGTTGGCAAATGCAACAGAACCGGGCGTTTTGGACAAGCTTTGCGCTGCATTGAACATCAACAAAAGAAGCGTTGATCGGGATTTGGATGTGTACCGTAATCTGCTTTCCAAGTTGGTTCAGGCAAAAGAATTGCTAAGGGAATATATTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGACTGAAACTCAAAAGGCTAATGAGGCCATTTCAAAATTTTTGGGACAAAGTATCAACTTTCCTGCCTCTAGACACTAA 903 0.4341 MAAVTSLSFSALTQCSERKPAFASSRFLGFNSEALRFRTNISYHYAAIGASHSASKMIIQCMSSATDVPTVTGTKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMDGYPSDEDRDAIFQAYIRALKEEPEQYRIDAKKLEEWARSQNPNSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANATEPGVLDKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLREYIDREKKKREERTETQKANEAISKFLGQSINFPASRH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0487 300 Pfam Thylakoid formation protein 70 275 IPR017499 GO:0010207|GO:0015979
Lele32g0487 300 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 293 IPR017499 GO:0010207|GO:0015979
Lele32g0487 300 Coils Coil 247 274 - -
Lele32g0487 300 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Lele32g0487 300 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 67 272 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0487 Lele-ChrLele32 3067644 3070326 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0514 29 3114178 3118165 Lele32g0487 32 3067644 3070326 hybridization
Lele30g0899 30 12827768 12830395 Lele32g0487 32 3067644 3070326 hybridization