Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0899 ATGGCCGCTGTTACCTCTTTGTCCTTCTTCGCATTAACCCAATGCTCTGAAAGAAAGCCAGCTTTCGCTTCCTCTCGCTTCCTCGGATTCAATTCGGAGGCATTACGGTTTCGGACGAATATTTCTTACCATTATGCTGCTGTTGGAGCTTCACATACCGCTTCTAAGATGATTATTCAATGCATGTCGTCTGCGACAGATGTTCCCACGGTATCTGGGACAAAATCTAATTTCCTCAAGGCATATAAACGACCGATCCCTAGTATCTACAACACTGTGCTGCAGGAACTCATTGTTCAGCAGCATTTAATGAGATACAAGAGATCATACCGTTATGACCCTGTATTTGCACTTGGTTTTGTCACTGTGTATGATCAACTCATGGACGGGTATCCTAGCGATGAAGATCGAGATGCCATCTTCCTAGCATATATCAGGGCATTGAAGGAAGAGCCAGAACAATATAGGTTAGAAGATAGAGCACTTTTTGTTGAGTCTAAAATATCCAAAGGAAGAATAGATGCAAAGAAGTTGGAAGAGTGGGCCCGGGCTCAGAACCCAAATTCCCTAGTTGAGTTTTCTTGCAGAGAAGGAGAGGTGGAGGGAATATTGAAGGATATTGCAGAAAGAGCAGGTGGAAAGGGCGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTATTTCGACTTCTTGAGTTGGCAAATGCAACAGAACCGGCCGTTTTGGACAAGCTTTGCGCTGCCTTGAACATCAACAAAAGAAGCGTTGATCGGGATTTGGATGTGTACCGTAATCAGCTTTCCAAGTTGGTTCAGGCAAAAGAATTGCTAAGGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGACTGAAACTCAAAAGGCCAATGAGGCCATTTCAAAATTTTTGAGACAAAGTATCAACTTTCCCGCCTTTAGACATTAA 951 0.4311 MAAVTSLSFFALTQCSERKPAFASSRFLGFNSEALRFRTNISYHYAAVGASHTASKMIIQCMSSATDVPTVSGTKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMDGYPSDEDRDAIFLAYIRALKEEPEQYRLEDRALFVESKISKGRIDAKKLEEWARAQNPNSLVEFSCREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANATEPAVLDKLCAALNINKRSVDRDLDVYRNQLSKLVQAKELLREYVDREKKKREERTETQKANEAISKFLRQSINFPAFRH 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0899 316 Coils Coil 270 293 - -
Lele30g0899 316 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 308 IPR017499 GO:0010207|GO:0015979
Lele30g0899 316 Pfam Thylakoid formation protein 70 160 IPR017499 GO:0010207|GO:0015979
Lele30g0899 316 Pfam Thylakoid formation protein 165 291 IPR017499 GO:0010207|GO:0015979
Lele30g0899 316 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 67 288 IPR017499 GO:0010207|GO:0015979
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele30g0899 Lele-ChrLele30 12827768 12830395 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0899 30 12827768 12830395 Lele31g1030 31 17278403 17283504 hybridization
Lele30g0899 30 12827768 12830395 Lele32g0487 32 3067644 3070326 hybridization