Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0442 ATGGTGGAACTCGTTGCGTTTCAGGCTAACCTGGAGACCGTATTCGGCGAGGGACGTCGTGGCACTGCGAGGCAAACTCAGGCAAACCTACGGGTCCAACGAGATGGCCAAGAGGCTATGGCGAACCCTCAAAACCCACCAAGCCAATGTCAAAGCCTCAAGAACCTTCGGTGCACTCGACCCTGTTCAGCTGACTACGATACTGGTTTGGGTGGCACTACAGCCACCGTCAAGCTCTGCAAGCTTTTTGTTGAAAGTGGTGCTGCTGGTGTCCACATCGAAGATCAATCCTCTCTGACCAAAAAATGTGGTCACATGGCCGGAAAAGTTCTAGTAGCCATTAGTGAACACATCAACAGGCTCGTGGCTGCAAGGCTGCAATTTGATGTAATGGGAGTGGAAACAGTACTCGTGGCTGGAACTGATGCAGAAGCAGCTACACTGATTCAGTATAATATAGACACAAGGGACCATCAGTTTATTCTGGACGTGAGAAACCCTAGCCTGAGAGGAAAAAGCTTGGCAACTCTTATGGCAGAGAACGTGACTGCGGTGAAAAACGGAGCTGAGCTTCAGGCTATTGAAGACCATTGGCTATCAATAGCAAAGTTGAAAACTTTTTCTGAGGCAGTTGAGGATGCAATTAAGAACATGAACATAGGGGAAGAAGATAAGAGAAGAAGGTTGAATGGATGGATGAAATATTCGAGTTATGAGAAGTGTTTGTCCAATGAGGAAGGAAGAGAGATTGCTGAGAGATTGGACGTGAGAAACCCGTTCTGGGATTGGGACTTGCCAAGAACAAGAGAAGGGTTTACAGATTCAAGGGGTCTGTTAAAGCAGCAATTGTACGTGGATGGGGTTAAGTCTAAACACCCAGAGATGATTCTGGGTTATAATCTTTCTCCATCATTTAACTGGGATGCTTCTGGTATGAGTGAAGAACAAATGATTGGGTTCATACCCAGAATTGCAAAGTTGGGGGGAACGCTGGATTATGTGGAGAAGATTCAGAGAGAGGAGAGGAATAATGGGGTTGATAGACTTGCTCATCACAAATGGGCAGGGGATAATTATTATGATAAGTATCTCAAGACTGTTCAGGGAGGATTGACTGCAGAGCAATTCAAGCAAACATGGACTAGGCCTGGAACTGTGGATATGGGTGGAGGGGGTACTGTGGTCGTCGCCAAGGCCAGAATGTAG 1206 0.4677 MVELVAFQANLETVFGEGRRGTARQTQANLRVQRDGQEAMANPQNPPSQCQSLKNLRCTRPCSADYDTGLGGTTATVKLCKLFVESGAAGVHIEDQSSLTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVAGTDAEAATLIQYNIDTRDHQFILDVRNPSLRGKSLATLMAENVTAVKNGAELQAIEDHWLSIAKLKTFSEAVEDAIKNMNIGEEDKRRRLNGWMKYSSYEKCLSNEEGREIAERLDVRNPFWDWDLPRTREGFTDSRGLLKQQLYVDGVKSKHPEMILGYNLSPSFNWDASGMSEEQMIGFIPRIAKLGGTLDYVEKIQREERNNGVDRLAHHKWAGDNYYDKYLKTVQGGLTAEQFKQTWTRPGTVDMGGGGTVVVAKARM 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0442 401 Pfam Isocitrate lyase family 48 277 IPR006254 GO:0004451|GO:0019752
Lele32g0442 401 Pfam Isocitrate lyase family 329 373 IPR006254 GO:0004451|GO:0019752
Lele32g0442 401 Pfam Isocitrate lyase family 283 328 IPR006254 GO:0004451|GO:0019752
Lele32g0442 401 ProSitePatterns Isocitrate lyase signature. 101 106 IPR018523 GO:0003824
Lele32g0442 401 Gene3D - 244 369 IPR040442 -
Lele32g0442 401 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 50 370 IPR015813 GO:0003824
Lele32g0442 401 Gene3D - 19 237 IPR040442 -
Lele32g0442 401 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 283 328 IPR006254 GO:0004451|GO:0019752
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0442 Lele-ChrLele32 2794049 2795907 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0462 29 2829797 2831887 Lele32g0442 32 2794049 2795907 hybridization
Lele30g0942 30 13079607 13080405 Lele32g0442 32 2794049 2795907 hybridization