Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0942 ATGGCTGCGGTGAAAAACGGAGCTGAGCTTCATGCTATTGAAGACCAGTGGCTATCAATAGCAAAGTTGAAAAATTTTTCTGAGGCAGTTGAGGATGCAATAATTAAGAACATGAACATAAGGGAAGAAGATAAGAGAAGAAGGTTGAATGAATGGATGAAATATTCGAGTTATGAGAAGTGTTTGTCCAATGAGGAAGGAAGAGAGATTGCTGAGAGATTGGGCGTTAGAAACCTGTTCTGTGATTGGGACTTGCCAAGAACAAGAAAAGGGTTTTACAGATTCAAAGGGTCTGTTAAAGCAGCAACTGTACGTGGATGGTTAAAGCAGCAACTGTACGTGGATGAGATGATGCTGGGTTATAATCTTTCTCCATCATTTAACTGGGATGCTTCTGGTATGAGTGATGAACAAATGATTGAGTTCATACCCAGAATTGCAAAGTTGGGGCATGTGTGGCAGTTCATAACAGTGGGTGGTTTACACTCAAATGCACTAATTACTTCAACATTTGCAAGGGATTTTGCAAACAGGGGAATGCTGGCTTATGTGGAGAAGATTCAGAGAGAGGAGAGGAATAATGGGGTTGATACACTTGCTCATCAGAAATGGGCAGGGGCTGATTATTATGATAAGTATCTCAAGACTGTTCAGGGAGGTGTGGCTTCAACTGCTGCAATGGGCAAAGGCAAGTCATGA 699 0.4177 MAAVKNGAELHAIEDQWLSIAKLKNFSEAVEDAIIKNMNIREEDKRRRLNEWMKYSSYEKCLSNEEGREIAERLGVRNLFCDWDLPRTRKGFYRFKGSVKAATVRGWLKQQLYVDEMMLGYNLSPSFNWDASGMSDEQMIEFIPRIAKLGHVWQFITVGGLHSNALITSTFARDFANRGMLAYVEKIQREERNNGVDTLAHQKWAGADYYDKYLKTVQGGVASTAAMGKGKS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0942 232 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 220 IPR015813 GO:0003824
Lele30g0942 232 Gene3D - 109 220 IPR040442 -
Lele30g0942 232 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 2 109 IPR006254 GO:0004451|GO:0019752
Lele30g0942 232 Pfam Isocitrate lyase family 114 230 IPR006254 GO:0004451|GO:0019752
Lele30g0942 232 Pfam Isocitrate lyase family 2 106 IPR006254 GO:0004451|GO:0019752
Lele30g0942 232 Coils Coil 23 43 - -
Lele30g0942 232 Gene3D - 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0942 Lele-ChrLele30 13079607 13080405 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0942 30 13079607 13080405 Lele31g1083 31 17639632 17641762 hybridization
Lele30g0942 30 13079607 13080405 Lele32g0442 32 2794049 2795907 hybridization