Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0436 ATGGCTAAGCTTTGCCGGAAAATCACCCTTTGTAATCGGGTTGAACACCGCATTTCCGGTCTCCGGCGACGCATTCTCCGCCTTCTCCACCACTTCTTGCTCTGTTCCGGAAGCAAGCCTTCCAAGTACCTCATGCTATCACATTTCGCCGAGCATTCTCCGCCGTCGCTGACGTCTTCCTCTTCCGGTGAGGCTATTCATGATGAATCGGGCCAGGGCTCGCTATCTCAATTTCACAAGCCTGATTCGGACTCCGATTTGGTTGCTCTCAAGATCAGCCTCCTGGGGGACTGCCAAACAGGGAAGACCAGTTTTCTGGCGAAATATATAGGGAATGGACATGAACAGGGAAGCCAGGAGAAGAAGGGACTGAATCAGATTGATAAAACTTTAGTCGTGGAAGGGGCACGTATATCGTACTGTATCTGGGAAGTAGAAGGTGGTGGAAGGTCGCAGGACCAGATTCCATTGGCTTGTAAGGACTCCGTGGCAATCTTGTACATGTTTGATCTAACAAGCCGATGTACGTTAAACAGTGTGATTGGGTGGTACCAAGAAGCCAGGAAATGGAATCAGACTGCGATTCCAGTGATGATAGGAACCAAGTTTGATGATTTCATTCAACTTCCCATGGATTTGCAATGGACCATCGCCAGTGAGGCAAGAAGATACGCAAAGGCCATGAATGCAACACTCTTCTTTTCAAGTGCTGCCTACAACATCAACGTGAACAAGATCTTCAAGTTCATCACAGCCAAACTCTTCGACCTGCCATGGACGCTGGAACGAAATCTCACAGTTGGCGAGCCCATCATAGATTTCTAG 825 0.4861 MAKLCRKITLCNRVEHRISGLRRRILRLLHHFLLCSGSKPSKYLMLSHFAEHSPPSLTSSSSGEAIHDESGQGSLSQFHKPDSDSDLVALKISLLGDCQTGKTSFLAKYIGNGHEQGSQEKKGLNQIDKTLVVEGARISYCIWEVEGGGRSQDQIPLACKDSVAILYMFDLTSRCTLNSVIGWYQEARKWNQTAIPVMIGTKFDDFIQLPMDLQWTIASEARRYAKAMNATLFFSSAAYNINVNKIFKFITAKLFDLPWTLERNLTVGEPIIDF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0436 274 Gene3D - 80 263 IPR027417 -
Lele32g0436 274 PANTHER - 87 261 - -
Lele32g0436 274 ProSiteProfiles small GTPase Rab1 family profile. 84 274 - -
Lele32g0436 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 266 IPR027417 -
Lele32g0436 274 PIRSF GTPase_Tem1 2 274 IPR017231 -
Lele32g0436 274 Pfam Ras family 91 254 IPR001806 GO:0003924|GO:0005525
Lele32g0436 274 SMART rab_sub_5 90 257 - -
Lele32g0436 274 MobiDBLite consensus disorder prediction 55 80 - -
Lele32g0436 274 FunFam Septum-promoting GTP-binding protein 1 80 264 - -
Lele32g0436 274 PRINTS Transforming protein P21 ras signature 90 111 - -
Lele32g0436 274 PRINTS Transforming protein P21 ras signature 131 153 - -
Lele32g0436 274 PRINTS Transforming protein P21 ras signature 192 205 - -
Lele32g0436 274 PRINTS Transforming protein P21 ras signature 232 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0436 Lele-ChrLele32 2752674 2754129 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0455 29 2784608 2786054 Lele32g0436 32 2752674 2754129 hybridization
Lele30g0948 30 13123779 13128523 Lele32g0436 32 2752674 2754129 hybridization