Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0948 ATGGCTAAGCTTTGCCGGAAAATCACCCTTTGTAATCGGGTTGAACACCGCATTTCCGGTCTCCGGCGACGTGTTCTCCGCCTTCTCCACCACTTCTTGCTCTGTTCCGGAAGCAAGCCTTCCCAGTACCTCATGCTATCACATTTCGCCGAGCACTCTCCGCCGTCGCCGACGTCTTCCTCTGCCGGTGAGGCTATTCATGATGAATCGGGTCAGGGCTCGCTATCTCAATTTCACAAGCCTGATTCGGACTCCGATTTGGTTGCTCTCAAGATCAGCCTCCTAGGGGACTGCCAAACAGGGAAGACCAGTTTTCTGGCGAAATATATAGGGAATGAACATGAACCTGGAAGCCAGGAGAAGAAGGGACTGAATCAGATTGACAAAACTTTAGTCGTGGAAGGGGCACGTATATCGTACTGTATCTGGGAATTAGAAGGGGGTGGAAGGTCTCAAGACCAGATTCTATTGGCTTGTAAGGACTCCGTGGCAATCTTGTACATGTTTGATTTAACAAGCCGATGTACTTTAAACAGTGTGATTGGATGGTACCAAGAAGCCAGGAAATGGAATCAGACTGCGATTCCAGTGATGATAGGAACCAAGTTTGATGATTTCATTCAACTTCCCATGGATTTGCAATGGACCATCGCCAGTGAGGCAAGAAGATACGCAAAGGCCATGAATGCAACACTCTTCTTTTCAAGTGCTGCCTACAACATCAACGTGAACAAGATCTTCAAGTTCATCACAGCCAAACTCTTCGACCTGCCATGGACACTGGAACGAAATCTCACCGTTGGCGAGCCCATTATAGATTTCTAAGAAACAATTGCTAATGCAGAATCTGGACTAACTAAACAAGAAGCATGGCATATGTGTTTCCAACTTCCTTGGTTTCTCGTTAAGTTTCTGAGAGTTTATCTTCATATGTTAGCAGAAGTTGACATTTATGGACCACAAGAAAGCAACCAATTGTCACCAACTTTCCTTTCAGAGACCCCATTGTTCCCAGTCGAATCTGCATTTACCAAATACGATCGAAGACTGGAGAACAGAGTTGAGTTGCCTTCTTTTTCTGGGAAATGGTTGTGCTGTAAAAGTGATCGACTTCGTTATCTTCCTCTTCTTGCTGGTAATAGCTCAGGTAGCTCCCCTTCTAGATGCTCAAACCTGCATACGTCACACTTACTCCCCAGACTTTCTCGTCCAACTCAAAAACTGGTATGCCTACGAGTATCAGTATGGCGAGTATCTCGTGATAGACAAGCCCCGTTTCTTCGTCGAACTCATCTTCGAGTTAATCTTCCAATGGCCACTTGCTCTTCTCAATCTTTACGCCATTTTGAATTCCAAGCCCTAGTTCAAACCAACTTGCTTGATCTACGGCTTCTCTGCGTCTACTTCCATGGTATGGCAACTGCTAAGCTACTGATGTTGTACTGCCCTTTCATGGGTTTAGGAGTCTTAGCAACTCTGCGAGATGATTCAGATCTGCCATTTGATGTTACTATGCAGCTTGGCTGTAGGCGATCCCACACTCCCTTCCTTCCTCCTCCCTGTGATTCTTGGCCGAGACAAAATTGTGATCCAATTGTCCATCGATTCATTAAAAGAAGCAAATTTGTGCCCAGATTTGTGGCTTCACTGGTTTCATCTTCTGGTAAAATGTTTTTTGCTTGTTTGAGGTTGCTATTCTGTCAGAAATGCCTTGTCCCATAA 1722 0.4535 MAKLCRKITLCNRVEHRISGLRRRVLRLLHHFLLCSGSKPSQYLMLSHFAEHSPPSPTSSSAGEAIHDESGQGSLSQFHKPDSDSDLVALKISLLGDCQTGKTSFLAKYIGNEHEPGSQEKKGLNQIDKTLVVEGARISYCIWELEGGGRSQDQILLACKDSVAILYMFDLTSRCTLNSVIGWYQEARKWNQTAIPVMIGTKFDDFIQLPMDLQWTIASEARRYAKAMNATLFFSSAAYNINVNKIFKFITAKLFDLPWTLERNLTVGEPIIDFXETIANAESGLTKQEAWHMCFQLPWFLVKFLRVYLHMLAEVDIYGPQESNQLSPTFLSETPLFPVESAFTKYDRRLENRVELPSFSGKWLCCKSDRLRYLPLLAGNSSGSSPSRCSNLHTSHLLPRLSRPTQKLVCLRVSVWRVSRDRQAPFLRRTHLRVNLPMATCSSQSLRHFEFQALVQTNLLDLRLLCVYFHGMATAKLLMLYCPFMGLGVLATLRDDSDLPFDVTMQLGCRRSHTPFLPPPCDSWPRQNCDPIVHRFIKRSKFVPRFVASLVSSSGKMFFACLRLLFCQKCLVP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0948 573 MobiDBLite consensus disorder prediction 54 80 - -
Lele30g0948 573 PANTHER - 87 265 - -
Lele30g0948 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 277 IPR027417 -
Lele30g0948 573 SMART rab_sub_5 90 257 - -
Lele30g0948 573 Gene3D - 80 264 IPR027417 -
Lele30g0948 573 Pfam Ras family 91 254 IPR001806 GO:0003924|GO:0005525
Lele30g0948 573 ProSiteProfiles small GTPase Rab1 family profile. 84 294 - -
Lele30g0948 573 FunFam Septum-promoting GTP-binding protein 1 80 264 - -
Lele30g0948 573 PRINTS Transforming protein P21 ras signature 192 205 - -
Lele30g0948 573 PRINTS Transforming protein P21 ras signature 131 153 - -
Lele30g0948 573 PRINTS Transforming protein P21 ras signature 90 111 - -
Lele30g0948 573 PRINTS Transforming protein P21 ras signature 232 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0948 Lele-ChrLele30 13123779 13128523 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0948 30 13123779 13128523 Lele31g1089 31 17684745 17686199 hybridization
Lele30g0948 30 13123779 13128523 Lele32g0436 32 2752674 2754129 hybridization