Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0391 ATGGGAAAGAATCAGAAGTCGGAGCTGGGGAGGGCTTTGGTGAAGCAGCACAACCAGATGATTCAGCAGAGTAAGGAAAAGGGTCGTTTCTACAAGAATCAGCAAAAGAAGGTTTTGGAATCGGTCACAGAGGTGACCGACATCGATGCGATCATCGAACAAGCAGACGAGGCCGAGCGTCTCTTCGTCGACAACAACCCCGCCCCTGACCTCCCCATTAGTCTGGATGCAGGCTCTAGCACTAGTGAATTGACTCCTGAAGAGAGGAGAGATCTTCAGAAGAGAGAGGAGGCGCTGCATGCTGGCAGTCTCCGAGTTCCACGCAGGCCGCCATGGAGTGCGAACATGTCTGTGGAGGAGCTTGATGCCAATGAAAGACAGGCTTTCTTAACTTGGCGTCGCAGTCTAGCAAGACTTGAGGAAAATGAGAAGCTTGTCCTTACACCTTTTGAGAAGAATCTTGATATTTGGAGACAGCTTTGGCGAGTTGTTGAGCGTAGTGATTTGCTTGTGATGGTTGTTGATTCGCGAGATCCGCTTTTTTACCGCTGTCCTGATCTTGAGGCGTATGCAAGGGAGGTTGATGAACATAAACGGACGTTGCTGCTGGTTAACAAGGCAGATCTTTTGCCCACTCCTATCAGAGAGAGATGGGCAGAGTACTTCTGGGCCCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCTTCTGCAGCTCTGGAAGGCCATAAGCTTCCTTCGTCATCGGATGCTGATAATTCAAAGAAGTCCAGTAACCCAGATGCAAAAATATATGGCAGAGATGAACTCCTGGCTCGGTTACAGTCAGAAGCAGAAGATATTGTAGAGAGGAGGAGAAAATCAAGCTCCTCTGACACAGGGCCTTCTGATATTCAATCTAGTAGTGAGAATGCTTCTGGTAGTTCGTCATCAAGAAATGTCATTGTCGGATTTGTTGGTTATCCTAATGTGGGTAAAAGTTCAACTATCAATGCTTTGGTAGGCCAAAAACGGACGGGTGTCACCTCCACTCCAGGGAAGACAAAGCACTTCCAAACGTTAATAATTTCTGATAGGCTAACCCTTTGTGACTGCCCTGGGTTAGTTTTTCCATCTTTTTCAAGCTCAAGATATGATATGATTGCCTGTGGGGTGCTGCCCATTGATAGGATTACTGAACACAGAGAGGCTATCCAGGTTGTGGCCGATAAAGTCCCAAGACATGTAATTGAGGAAGTTTATAAGATCACCCTTCCAAAGCCTAAGCCATATGAACCCCAATCTAGGCCTCCGCTGGCGTCTGAACTTCTGAGAACTTATTGTGCTTCTCGTGGGTATGTTGCCTCTAGTGGACTACCTGATGAAACTAGAGCTGGCCGTCAGATACTGAAAGATTACATTGATGGAAAGTTGCCTCATTATGAAATGCCCCCTGGAATGTCGAATGAGGAACAAGCTGTGGCCAAACCCGGAGCACTCGACTCGGTTAACTTAAACAAATCAGATTCTTATGTTGAAAATTCTTCAGATGTCGAGAGTGAAGTCCCTAATCTTGAGCATGTACTGGAGGATCTCAATTCATTTGACATGGCTAATGACCTTGCTCCAAAGAAAGCTACTGTCAAGAAGTCTAATGCTTCTCACAAACATCACAAGAAGCCTCAGAGGAAAAAAGATCGTTCATGGAGAGTAGGAAATGATGATGATGATGGGATGCCAGTTGCCAGATTCTTTCAGAAACCAGTAAATACAGGTCCAATGGGAGTCTGA 1773 0.4614 MGKNQKSELGRALVKQHNQMIQQSKEKGRFYKNQQKKVLESVTEVTDIDAIIEQADEAERLFVDNNPAPDLPISLDAGSSTSELTPEERRDLQKREEALHAGSLRVPRRPPWSANMSVEELDANERQAFLTWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPTPIRERWAEYFWAHDILFIFWSAKAASAALEGHKLPSSSDADNSKKSSNPDAKIYGRDELLARLQSEAEDIVERRRKSSSSDTGPSDIQSSSENASGSSSSRNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDRLTLCDCPGLVFPSFSSSRYDMIACGVLPIDRITEHREAIQVVADKVPRHVIEEVYKITLPKPKPYEPQSRPPLASELLRTYCASRGYVASSGLPDETRAGRQILKDYIDGKLPHYEMPPGMSNEEQAVAKPGALDSVNLNKSDSYVENSSDVESEVPNLEHVLEDLNSFDMANDLAPKKATVKKSNASHKHHKKPQRKKDRSWRVGNDDDDGMPVARFFQKPVNTGPMGV 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0391 590 Pfam 50S ribosome-binding GTPase 317 373 IPR006073 GO:0005525
Lele32g0391 590 MobiDBLite consensus disorder prediction 539 590 - -
Lele32g0391 590 PRINTS GTP1/OBG GTP-binding protein family signature 317 337 IPR006073 GO:0005525
Lele32g0391 590 PRINTS GTP1/OBG GTP-binding protein family signature 363 378 IPR006073 GO:0005525
Lele32g0391 590 MobiDBLite consensus disorder prediction 293 311 - -
Lele32g0391 590 FunFam Large subunit GTPase 1 156 373 - -
Lele32g0391 590 MobiDBLite consensus disorder prediction 543 560 - -
Lele32g0391 590 MobiDBLite consensus disorder prediction 71 91 - -
Lele32g0391 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 447 IPR027417 -
Lele32g0391 590 Gene3D - 156 373 IPR027417 -
Lele32g0391 590 MobiDBLite consensus disorder prediction 561 575 - -
Lele32g0391 590 CDD HSR1_MMR1 156 372 - -
Lele32g0391 590 FunFam Large subunit GTPase 1 377 478 - -
Lele32g0391 590 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 564 IPR043358 GO:0003924
Lele32g0391 590 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 157 372 IPR030378 GO:0005525
Lele32g0391 590 MobiDBLite consensus disorder prediction 282 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0391 Lele-ChrLele32 2474273 2477193 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0412 29 2523704 2527586 Lele32g0391 32 2474273 2477193 hybridization
Lele30g0999 30 13445569 13448472 Lele32g0391 32 2474273 2477193 hybridization