Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0999 ATGGGAAAGAATCAGAAGTCGGAGCTGGGGAGGGCTTTGGTGAAGCAGCACAACCAGATGATCCAGCAGAGTAAGGAAAAGGGTCGGTTCTACAAGAATCAGCAGAAGCAGATTTTGGAATCGGTCACAGAGGTCACCGACATCGATGCCATCATCGAACAAGCAGACGAGGCCGAGCGTCTATTCGTCGCCAACAACCCCCCTGACCTCCCCATTAGCCTGGATGCAGGCTCTAGCACTAGTGAATTGACTCCTGAAGAGAGGAGAGATCTTCAGAAGAGAGAGGAGGCGCTGCATGCTGGCAGTCTCCGAGTTCCACGCAGGCCGCCATGGAGTGCGAACATGTCTGTGGAGGAGCTTGATGCCAATGAAAGACAGGCTTTCTTGACTTGGCGTCGCAGTCTAGCAAGACTTGAGGAAAATGAGAAGCTTGTCCTTACACCTTTTGAGAAGAATCTTGATATTTGGAGACAGCTTTGGCGAGTTGTCGAGCGTAGTGATTTGCTTGTGATGGTTGTTGATTCGCGAGATCCGCTTTTTTACCGCTGTCCTGATCTTGAGGCATATGCAAGGGAGGTTGATGAACATAAACGGACGTTGCTGCTGGTTAACAAGGCAGATCTTTTGCCCACTCCTATAAGAGAGAGATGGGCAGAGTACTTCTGGGCTCATGATATTCTCTTCATCTTCTGGTCAGCTAAATCTGCTTCTGCAGCTCTGGAAGGCCAAAAGCTTCCTTCGTTATCGGATGCTGATAATTCAAAGAAGTCCAGTAACCCAGATGCAACAATATATGGCAGAGATGAGCTCCTGGCTCGGTTACAGTCAGAAGCAGAAGAGATTGTAGAGAGGAGGAGAAAATCAAGCTCCTCTGACACAGGGCCTTCTGATATTCAATCTAGTAGTCAAAATGCTTCTGGTAGTTCGTCATCAAGAAATGTCATTGTCGGATTTGTTGGTTATCCCAATGTGGGTAAAAGTTCAACTATCAATGCTTTGGTAGGCCAAAAACGGACGGGTGTCACCTCCACTCCAGGGAAGACAAAGCACTTCCAAACGTTAATAATTTCTGATAGGCTAACCCTTTGTGACTGTCCTGGGTTAGTTTTTCCTTCTTTTTCAAGCTCAAGATATGATATGATTGCCTGTGGGGTGCTGCCCATCGATAGGATTACTGAACACAGAGAGGCTGTCCAGGTTGTGGCCGATAAAGTCCCAAGACATGTAATTGAGGAAGTTTATAAGATCACCCTTCCAAAGCCTAAGCCATATGAACCCCAATCTAGGCCTCCTCTGGCATCTGAACTTCTGAGAACTTATTGTGCTTCTCGTGGGTATGTTGCCTCTAGTGGACTACCTGATGAAACTAGAGCTTCCCGTCAGATACTGAAAGATTACGTTGATGGAAAGTTGCCTCATTATGAAATGCCCCCTGGAATGTCGGATGAGGAACAAGCTGTGGCCAAACCCGGAGCACTCGACTCGGTTAACTTAAACAAATCAGATTCTTCTCACGTTGAAAATTCTTCAGATGTCGAGAGTGAAGTCGCGCCTAATCTTGAGCATGTACTGGAGGATCTCAATTCATTTGACATGGCTAATGACCTTGCTCCAAACAAAGCTACTGTCAAGAAGTCTAATGCTTCTCACAAACATCACAAGAAGCCTCAGAGGAAAAAAGATCGTTCATGGAGAGTAGGAAATGATGATGATGATGATGATGATGATGGGATGCCAGTTTCCAGATTCTTTCAGAAACCGGTAAATGCAGGTCCAATGGGAGTCTGA 1788 0.4642 MGKNQKSELGRALVKQHNQMIQQSKEKGRFYKNQQKQILESVTEVTDIDAIIEQADEAERLFVANNPPDLPISLDAGSSTSELTPEERRDLQKREEALHAGSLRVPRRPPWSANMSVEELDANERQAFLTWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPTPIRERWAEYFWAHDILFIFWSAKSASAALEGQKLPSLSDADNSKKSSNPDATIYGRDELLARLQSEAEEIVERRRKSSSSDTGPSDIQSSSQNASGSSSSRNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDRLTLCDCPGLVFPSFSSSRYDMIACGVLPIDRITEHREAVQVVADKVPRHVIEEVYKITLPKPKPYEPQSRPPLASELLRTYCASRGYVASSGLPDETRASRQILKDYVDGKLPHYEMPPGMSDEEQAVAKPGALDSVNLNKSDSSHVENSSDVESEVAPNLEHVLEDLNSFDMANDLAPNKATVKKSNASHKHHKKPQRKKDRSWRVGNDDDDDDDDGMPVSRFFQKPVNAGPMGV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0999 595 MobiDBLite consensus disorder prediction 536 595 - -
Lele30g0999 595 PRINTS GTP1/OBG GTP-binding protein family signature 316 336 IPR006073 GO:0005525
Lele30g0999 595 PRINTS GTP1/OBG GTP-binding protein family signature 362 377 IPR006073 GO:0005525
Lele30g0999 595 Gene3D - 155 372 IPR027417 -
Lele30g0999 595 MobiDBLite consensus disorder prediction 545 561 - -
Lele30g0999 595 MobiDBLite consensus disorder prediction 282 310 - -
Lele30g0999 595 CDD HSR1_MMR1 155 371 - -
Lele30g0999 595 Gene3D - 375 477 IPR023179 -
Lele30g0999 595 MobiDBLite consensus disorder prediction 494 516 - -
Lele30g0999 595 FunFam Large subunit GTPase 1 376 477 - -
Lele30g0999 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 446 IPR027417 -
Lele30g0999 595 Pfam 50S ribosome-binding GTPase 316 372 IPR006073 GO:0005525
Lele30g0999 595 MobiDBLite consensus disorder prediction 496 515 - -
Lele30g0999 595 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 565 IPR043358 GO:0003924
Lele30g0999 595 MobiDBLite consensus disorder prediction 292 310 - -
Lele30g0999 595 FunFam Large subunit GTPase 1 155 372 - -
Lele30g0999 595 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 156 371 IPR030378 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0999 Lele-ChrLele30 13445569 13448472 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0999 30 13445569 13448472 Lele31g1133 31 17956624 17959420 hybridization
Lele30g0999 30 13445569 13448472 Lele32g0391 32 2474273 2477193 hybridization