Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0412 ATGTTTGCATGTGTATTTCTCCTTTGGCCAAAGGGAAAAAGTGTTCTTTCCTCACTAGTATTTGCTCGTCGTAGTTTCTTTTTCTTGTCGTTGCATTTCTTCAAGCCTTGGCAACTCTTGGCAGTTCTGGGAAGTACTCTCAAATTTAAAGTAACTTGCAAAAGCATCCATAACGGAGAAGAAAAGCTTTCGAGACGCCGGGGGGATTTTAGGGTTTTGGACGAGACTTTCGTGCTGACACTTGTTTGGGCTTTCCTTCGGATTCCGACTACTATGGGAAAGAATCATAAGTTGGACCTAGGGAGGTCTTTGGTGAAGCAGCACAACCAGATGATCCAGCAGAGTAAGGAAAAGGGTCTGTTCTACAAGAATCAGCAGAAGAAGATTTTGGAATCGGTCACAGAGGTCACCGACATAGATGCCATCATCGAACAAGCAGACGAAGCCGAGCATCTCTTCGTCGCCAACAACCCCGCCCCTGACCTCACCATTAGTCTGGATGCAAGCTCTAGCACTAGTGAATTGACTCCTGAAGAGAGGAGAGATCTTCAGAAGAGAGAGGAGGCGCTGCATGCTGGCAGTCTCCGAGTTCCACGCAGGCCGCCATGGAGTGCGAATATGTCCGTGGAGGAGCTTGATGTTAATGAAAGACTAGCTTTCTTAACTTGGCGTCGCAGCCTAGCAAGACTTGAGGAAAATGAGAAGCTTGTCCTTACACCTTTTGAGAAGAATCTTGATATTTGGAGACAACTTTGGCGAGTTGTTGAGCGTAGTGATTTGCTTGTGATGGTTGTTGATTCGCGAGATCCACTCTTTTACCGCTGTCCTGATCTTGAGGCATATGCAAGGGAGGTTGATGACCATAAACTGACGTTGCTGCTGGTTAACAAGGCAGATCTTTTGCCCACTCCTATCAGAGAGAGATGGGCAGAGTACTTCCGGTCCCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCTTCTGCAGGTCTGGAAGGCAAAAAGCTTCCTTCGTTATTGGATGCTGATAATTCGAAGAAGTCCAGTAACCCAGATACGAAAATATATGGCAGAGATGAGCTCCTGGCTCGGTTACAGTCAGAAGCACAAGAGATTGTAGAGAGGAGGAGAAAATCAAGCTCCTCTTGCACAGGGCCTTCTTATATTCGGTCTTGTAGTGAAAATGCTTCTGGCAGTTCGTCATCAAGTAATGTCATTGTGGGATTTGTTGGTTATCCTAATGTGGGTAAAAGTTCTACTATCAACGCTTTGGTAGGCCAAAAACGGACAGGGGTCACCTCCACTCCAGGGAAGACAAAGCACTTCCAAACGTTGATAATTTCTGAAAGGCTAACACTTTGTGACTGTCCTGGGTTAGTTTTCCCGTCTTTTTCAAGCTCAAGATATGAGATGATTGCCTGTGGGGTGCTGCCCATTGATAGGATTACTGAACACAGGGAAGCTGTCCAGGTTGTGGCCGATAAAGTCCCAAGACGTGTCATTGAGGAAGTTTATAGGATCACCCTTCCAAAGCCTAAGCCATATGAACCCCAATCTAGGCCTCCTCTGGCATCCGAACTTCTGAGAACTTATTGCGCTTCTCGTGGGTATGTTGCCTCTAGTGGACTACCTGATGAAACTAGAGCTGCCCGTCAGATACTGAAAGATTACATCGACGGAAAGTTGCGTCATTATGAAATGCCCCCTGGAACGTTGATTGAGGAACAAGCTGTGGCCAAACCCGGAGGACTTGACTCAGTTAACTTAAACAAGTCAGATTCTTCTCTCATTGAAAATTCTTCAGATGTCGAGAGTGAAATCACAACTAATCTTGAGCACGTCCTGGATGATCTCAATTCATTTGACATGGCTAATGACCTTGCTCCAAAGAAAGGTACTGTCAAGAAGACTAATGCGTCCCACAAACATCATAAGAAGCCTCAGGAAAAAAGATCGTTCATGGAGAGTAGGAAATGA 1980 0.4571 MFACVFLLWPKGKSVLSSLVFARRSFFFLSLHFFKPWQLLAVLGSTLKFKVTCKSIHNGEEKLSRRRGDFRVLDETFVLTLVWAFLRIPTTMGKNHKLDLGRSLVKQHNQMIQQSKEKGLFYKNQQKKILESVTEVTDIDAIIEQADEAEHLFVANNPAPDLTISLDASSSTSELTPEERRDLQKREEALHAGSLRVPRRPPWSANMSVEELDVNERLAFLTWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDDHKLTLLLVNKADLLPTPIRERWAEYFRSHDILFIFWSAKAASAGLEGKKLPSLLDADNSKKSSNPDTKIYGRDELLARLQSEAQEIVERRRKSSSSCTGPSYIRSCSENASGSSSSSNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISERLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRITEHREAVQVVADKVPRRVIEEVYRITLPKPKPYEPQSRPPLASELLRTYCASRGYVASSGLPDETRAARQILKDYIDGKLRHYEMPPGTLIEEQAVAKPGGLDSVNLNKSDSSLIENSSDVESEITTNLEHVLDDLNSFDMANDLAPKKGTVKKTNASHKHHKKPQEKRSFMESRK 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0412 659 Gene3D - 467 569 IPR023179 -
Lele29g0412 659 PRINTS GTP1/OBG GTP-binding protein family signature 408 428 IPR006073 GO:0005525
Lele29g0412 659 PRINTS GTP1/OBG GTP-binding protein family signature 454 469 IPR006073 GO:0005525
Lele29g0412 659 Pfam 50S ribosome-binding GTPase 408 464 IPR006073 GO:0005525
Lele29g0412 659 Gene3D - 247 464 IPR027417 -
Lele29g0412 659 FunFam Large subunit GTPase 1 247 464 - -
Lele29g0412 659 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 248 463 IPR030378 GO:0005525
Lele29g0412 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 498 IPR027417 -
Lele29g0412 659 FunFam Large subunit GTPase 1 468 569 - -
Lele29g0412 659 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 92 651 IPR043358 GO:0003924
Lele29g0412 659 MobiDBLite consensus disorder prediction 631 659 - -
Lele29g0412 659 CDD HSR1_MMR1 247 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0412 Lele-ChrLele29 2523704 2527586 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0412 29 2523704 2527586 Lele31g1133 31 17956624 17959420 hybridization
Lele29g0412 29 2523704 2527586 Lele32g0391 32 2474273 2477193 hybridization