Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0371 ATGGTCACTGAAGATCTCAAATCGAAGCAGGTTCAGATCCGTGAAGTATGGGCCTCTAATCTCGAATCTGAATTCCGCCTCATCCGTGATTTGATCGATCGCTACCCTTTTATCTCCATGGACACCGAATTCCCCGGCGTCATCTTCCGTCCTCAGGTCGACCCCGCGGTCCCTTACCACCTCCGCCAGCTCCTTCCGTCTGATCACTACCGCCTCTTGAAGGCCAACGTGGACGCCTTGAATCTCATCCAAGTCGGTCTCACACTCTCCGATGCTGATGGCAACCTTCCCGACCTCGGATCTGAAAACCGATTTATCTGGGAGTTCAATTTCTGCGACTTCGACTTGGCGCGTGACTCCTTCGCCCCTGATTCCATCGAATTACTCGGCCGCCAGGGGATCGACTTCCAGAGAAACGTCGAGGACGGAGTCGACTCGGCGCGTTTCGCGGAGTTAATGATGTCGTCGGGGCTCGTCTGCAACGAGTCGGTGAGTTGGGTGACGTTTCACAGCGCATACGATTTCGGGTACCTGGTGAAGATCCTGACCCGACGGAGCCTGCCGAATGGGGTGGAGGAATTCTTGGGATTGTTGAGGGTGTTTTTCGGAAACAATGTTTACGACATCAAGCACATGATGAGGTTCTGCGAGAGCCTGTACGGGGGGTTGGACCGGGTGGCCAAGACCCTTAACGTGAACCGGGCGGCGGGGAAGTGCCATCAAGCCGGGTCAGACAGCTTGCTGACGTGGCACGCCTTTCAGAGAATGAGGGATATTTATTTTGTAAAGGAAGCGCCGGAGAATTATGCCGGCGTTTTGTATGGATTAGAGATTTTCAAAACGATATTGTTTTTTTCGAGAAATACATGGGGATTAGCAGCACTTGTCCAGGCCTGGGAAACGTTGATCCACATCTCTTCGCCGGCAACTGATCCTGGTATTGATCATTGA 951 0.53 MVTEDLKSKQVQIREVWASNLESEFRLIRDLIDRYPFISMDTEFPGVIFRPQVDPAVPYHLRQLLPSDHYRLLKANVDALNLIQVGLTLSDADGNLPDLGSENRFIWEFNFCDFDLARDSFAPDSIELLGRQGIDFQRNVEDGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPNGVEEFLGLLRVFFGNNVYDIKHMMRFCESLYGGLDRVAKTLNVNRAAGKCHQAGSDSLLTWHAFQRMRDIYFVKEAPENYAGVLYGLEIFKTILFFSRNTWGLAALVQAWETLIHISSPATDPGIDH 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0371 316 Gene3D - 2 279 IPR036397 GO:0003676
Lele32g0371 316 Pfam CAF1 family ribonuclease 16 145 IPR006941 -
Lele32g0371 316 SUPERFAMILY Ribonuclease H-like 13 276 IPR012337 -
Lele32g0371 316 FunFam Putative CCR4-associated factor 1 7 3 280 - -
Lele32g0371 316 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 277 IPR039637 GO:0004535|GO:0030014
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele32g0371 Lele-ChrLele32 2310487 2311661 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0395 29 2368592 2369437 Lele32g0371 32 2310487 2311661 hybridization
Lele30g1019 30 13612870 13613587 Lele32g0371 32 2310487 2311661 hybridization