Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1019 ATGTCGTCGGGGCTCGTCTGCAACGAGTCGGTGAGTTGGGTGACGTTTCACAGCGCATACGATTTCGGGTACCTGGTGAAGATCCTGACCCGACGGAGCCTGCCGAATGGGGTGGAGGAATTCTTGGGATTGTTGAGGGTGTTTTTCGGAAACAACGTTTACGACATGAAGCACATGATGCGGTTCTGCGAGAACCTGTACGGGGGGTTGGACAGGGTGGCCAAGACCCTCAACGTGAACCGGGCGGCGGGGAAGTGCCATCAAGCCGGGTCAGACAGCTTGCTGACGTGGCACGCCTTTCAGAGAATGAGGGATATTTATTTTTTAAAGGAAGGGCCGGAGAATTATGCCGGCGTTTTGTATGGATTAGAGATTTTCAAAACGATATTGTTTTTTTCGAGAAATAAATGGGGATTAGCAGCAATTGTCCAGACCTGGGAAACGTTGATCCACATCCATTTGCCTGCAACTGATCCTGGTATTGATCACTGA 492 0.5061 MSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPNGVEEFLGLLRVFFGNNVYDMKHMMRFCENLYGGLDRVAKTLNVNRAAGKCHQAGSDSLLTWHAFQRMRDIYFLKEGPENYAGVLYGLEIFKTILFFSRNKWGLAAIVQTWETLIHIHLPATDPGIDH 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1019 163 SUPERFAMILY Ribonuclease H-like 1 123 IPR012337 -
Lele30g1019 163 Gene3D - 1 123 IPR036397 GO:0003676
Lele30g1019 163 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 124 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1019 Lele-ChrLele30 13612870 13613587 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1019 30 13612870 13613587 Lele31g1150 31 18114077 18114919 hybridization
Lele30g1019 30 13612870 13613587 Lele32g0371 32 2310487 2311661 hybridization