Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0395 ATGATGGTCACTGATGATCTAAAATCGAAGCCTGTTCGGATCCGTGAAGTATGGGCCTCTAATATCGAATCCGAATTCCGACTCATCCGTGATTTGATCGATCGCTACCCTTTTATCTCCATGGACACCGAATTCCCCGGCGTCATCTTCCGTCCTCATGTCGACCCTGCGGTTCCTTACCATCTCCACCAGCTCCTTCCCTCCGATCACTACCGCCTCTTGAAGGCCAACGTGGACGCCTTGAATCTCATCCAAGTTGGTCTTACCCTCTCCGATGCTGATGGCAACCTTCCCGACCTCGGATCTGAAAACCGCTTCATCTGGGAGTTCAACTTCTGCGACTTCGACTTGGCGCGTGACTCTTTCGCCCCCGATTCCATCGAATTACTCCGCCGTCAGGGGATCGACTTCCAGAGAAACGTCGAGGACGGAGTCGGCTCGGCGCGGTTCGCGGAGTTGATGATGTCGTCGGGGCTCGTCTGCAACGAGTCGGTGAGTTGGGTGACCTTTCACAGTGCATACGATTTCGGGTACCTAGTGAAGATCCTGACCCGACGGAGCCTGCCGAATGGGGTGGAGGAATTCTTGGCATTGTTTAGGGTGTTTTTCGGAAACAACGTTTACGACATCAAGCACATGATGCGGTTCTGCAAGAGCCTGTACGGGGGATTGGACCGGGTGGCCAAGACCCTAAACGTGAACCGGGCGGTGGGGAAGTGCCATCAAGCCGGGTCAGACAGCTTGCTCACGTGGCACGCCTTTCAGAGGATGAGGGATATTTATTTTGTAAAGGATGGGCCGGAGAATTACGCCGGCGTTTTGTATGGATTAGAGGGGATGTGTTAA 846 0.539 MMVTDDLKSKPVRIREVWASNIESEFRLIRDLIDRYPFISMDTEFPGVIFRPHVDPAVPYHLHQLLPSDHYRLLKANVDALNLIQVGLTLSDADGNLPDLGSENRFIWEFNFCDFDLARDSFAPDSIELLRRQGIDFQRNVEDGVGSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPNGVEEFLALFRVFFGNNVYDIKHMMRFCKSLYGGLDRVAKTLNVNRAVGKCHQAGSDSLLTWHAFQRMRDIYFVKDGPENYAGVLYGLEGMC 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0395 281 FunFam Putative CCR4-associated factor 1 7 4 280 - -
Lele29g0395 281 Pfam CAF1 family ribonuclease 17 146 IPR006941 -
Lele29g0395 281 SUPERFAMILY Ribonuclease H-like 14 277 IPR012337 -
Lele29g0395 281 Gene3D - 3 280 IPR036397 GO:0003676
Lele29g0395 281 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 12 278 IPR039637 GO:0004535|GO:0030014
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele29g0395 Lele-ChrLele29 2368592 2369437 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0395 29 2368592 2369437 Lele31g1150 31 18114077 18114919 hybridization
Lele29g0395 29 2368592 2369437 Lele32g0371 32 2310487 2311661 hybridization