Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0335 ATGTTCTCGGAGAGAGACAAAGATGGATCCGGCGCTCTTAACTTCAAGATATCTAGTTTATTGCCACATTTAGCAATACCGATTAGTTGCTCCGTTAAGCACGCCTTACTGATGAAGCGTTCGATTCGACCGCTGTTTGGAGTTCTAATTGTCGTCGTCTTCGTCGCCACTCTCAGCTGCAGAAACTTTTTTAGGAGAGGCTTATTGTCCATTGATCTGGAGAGCAGAGTATGGGTTCAAGTTCCGGCAGCACCACCGTTGAACGCGACGCTGCTAAAATACGCCTCCATCGACATCGGAGAAGAGAAGTCGAAGCAAGAAATACAGCAGCTTCTCGATGGAAACTTTGCAAGTCAAGCCCGGCACCGTACATTTGTCTCTTGGCGTAGATTCATTCACCATGAGATCACTGAGAAGGACCCTAGGAGACTACCGGCAACGATACGCTCTCCGTTGTTTTATAGGTATTGGCTAGATTTCCGAAAGGTTTTGAACGATTGGGCCAGAAAAAAGAGGTTTCAGCCTGGTATTATGTCCGATTTAACGCGGCTAGTGAAGCTTCCGATCGATAGGCACAATGGATTGGCGGGTTCGGACCGGCCATACTCGTCCTGTGCGGTGGTTGGCAACAGTGGGATTTTGCTTAACAGCGACTATGGGAAGCTCATTGATAGCCATGAAGCAGTTATCCGTTTGAACAATGCAAGGATTGAGAAGTTTGAGAAGAAAGTGGGGTCTAAAACAAGCATTTCATTCGTAAATAGCAACATTTTGCATCTCTGTGCGAGGAGGACAGAATGCTTTTGCCACCCATATGGAGCTAATGTGCCAATGGCTCTGTACATTTGCCAACCAGCTCATTTCTTGGATTACTCGGTTTGCAATTCCTCTCACAAAGCACCATTGTTGGTCACCGATCCGCGGTTCGATATGCTGTGTGCTCGGATTGTGAAGTACTACTCCTTGAAGAGGTTTGTGGAGGAGACAGGGAAGGCTTTGGAAGAATGGAGCTCTGCACATGATGGTGCTCTATTTCATTACTCTTCTGGTATGCAAGCTGTTATGTTAGCTTTAGGAATCTGTGATAGAGTCAGTATATTTGGGTTTGGCAAGTCTGCCTCAGCTAGGCATCATTATCATACGAACCAGAAGGCTGAGCTTCAGTTGCATGACTATGAAGCAGAATATGCGTTTTACAGGGACCTGGTTGATGGACACAGAGCAATACCTTTTCTCTCGGACAAATTCAAGATTCCACCCGTTGTGTTTTATCAATGA 1278 0.4609 MFSERDKDGSGALNFKISSLLPHLAIPISCSVKHALLMKRSIRPLFGVLIVVVFVATLSCRNFFRRGLLSIDLESRVWVQVPAAPPLNATLLKYASIDIGEEKSKQEIQQLLDGNFASQARHRTFVSWRRFIHHEITEKDPRRLPATIRSPLFYRYWLDFRKVLNDWARKKRFQPGIMSDLTRLVKLPIDRHNGLAGSDRPYSSCAVVGNSGILLNSDYGKLIDSHEAVIRLNNARIEKFEKKVGSKTSISFVNSNILHLCARRTECFCHPYGANVPMALYICQPAHFLDYSVCNSSHKAPLLVTDPRFDMLCARIVKYYSLKRFVEETGKALEEWSSAHDGALFHYSSGMQAVMLALGICDRVSIFGFGKSASARHHYHTNQKAELQLHDYEAEYAFYRDLVDGHRAIPFLSDKFKIPPVVFYQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0335 425 Coils Coil 382 402 - -
Lele32g0335 425 Pfam Glycosyltransferase family 29 (sialyltransferase) 183 404 IPR001675 GO:0006486|GO:0008373
Lele32g0335 425 Gene3D Glycosyl transferase family 29 103 408 IPR038578 -
Lele32g0335 425 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 38 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0335 Lele-ChrLele32 2094226 2095503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0335 200 369 Glycosyltransferase AT3G48820 25.882 1.35e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0350 29 2145393 2147032 Lele32g0335 32 2094226 2095503 hybridization
Lele30g1057 30 13837164 13838441 Lele32g0335 32 2094226 2095503 hybridization