Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0350 ATGTGGGTTTTGAAGCTGCGACTAAATATTCCTTCTTCTTTATTCCGTTTCTTATACATCCCCTCCAGATTTTACTGCTTCTGCTTCTGCTCCTGCTCCATTCGATTTGAGTTTTTGCTTGGTTCTTCGAAGCTTCTCTGCGTACATTTGCCCTCACCAATTCCTCCCAGGGATCTCTTGCGGCTTCATTCGCTTATTTCATTCCGCATGCCTAATGTTCTCGGAGACAAAGATGGATCCGGCGCTCTTAACTTCAAGATCTCTAGTTTATTGCCACATTTAGCAATACCAACTAGCTGTTCCGTTAAGCACGCCTTACCGATGAAGCGTTCGATTCGCCCGCTGTTTGGTGTTCTAATTGTCGTTGTCTTCGTCGCCACTCTCAGCTGCAGAACCTTTGTTCGGAGAGGCTTATTGTCCATTGAGCTGGAGAGCAGAGTATGGGTTCAAGTTCCGGCAGCACCACCGTTGAACGCGACGCTGCTAAAATACGCCGCCATCGACATCGGAGAAGAGAAGTCGAAGCAAGAAATCCAGCAGCTTCTGGATGGAAACTTTGGAAGTCAAGCCGGGCACCGTACGTTTGTCTCTTGGCGTAGATTCATTCACCACGAGACCACTGAAAAGGACCCTAGGAGACTACCGGCAACGATACGTTCTCCGTTGTTTTATAGGTATTGGCTAGATTTCCGAAAGGTTTTGAACGATTGGGCCAGGAAAAAGAGGTTTCAGCCTGGTATTATGTCCGATTTAACGCGGCTAGTGAAGCTTCCGATCGATAGGCACAACGGATTGGCGGGTCCTGACCGGCCATACTCATCTTGTGCGGTGGTTGGCAACAGTGGGATTTTGCTGAACAGCGACTATGGGAAGCTCATTGATAGCCATGAAGCAGTTATACGATTGAACAATGCAAGGGTTGAGAAGTTTGAGAAGAAAGTGGGGTCTAAAACAAGCATTTCCTTCGTAAATAGCAACATGTTGCATCTCTGTGCAAGGAGGACAGAATGCTTTTGCCACCCATATGGAGCTAATGTGCCGATGGTTATGTACATTTGCCAACCAGCTCATTTCTTGGATTACACGGTTTGCAATACCTCGCACAAAGCACCATTGTTGGTCACCGATCCACGGTTCGATATGTTGTGTGCTCGGATTGTGAAGTACTATTCCTTGAAGAGGTTTGTGGAGGAGACAGGGAAGGCTTTGGAAGAATGGAGCTCTGCACATGATGGTGCTCTATTTCATTACTCTTCTGGTATGCAAGCTGTTATGTTAGCTTTAGGAATCTGTGATAGAGTCAGTATATTTGGGTTTGGCAAGTCTGCCTCAGCTAAGCATCATTATCATACGAATCAGAAGGCTGAACTTCATTTGCATGATTATGAAGCAGAATATGCGTTTTACAGGGACCTGGTCGTTGGACACACAACAATACCTTTTCTCTCGGACAAATTCAGGATTCCACCCGTTGTGTTGTATCAGTGA 1488 0.4624 MWVLKLRLNIPSSLFRFLYIPSRFYCFCFCSCSIRFEFLLGSSKLLCVHLPSPIPPRDLLRLHSLISFRMPNVLGDKDGSGALNFKISSLLPHLAIPTSCSVKHALPMKRSIRPLFGVLIVVVFVATLSCRTFVRRGLLSIELESRVWVQVPAAPPLNATLLKYAAIDIGEEKSKQEIQQLLDGNFGSQAGHRTFVSWRRFIHHETTEKDPRRLPATIRSPLFYRYWLDFRKVLNDWARKKRFQPGIMSDLTRLVKLPIDRHNGLAGPDRPYSSCAVVGNSGILLNSDYGKLIDSHEAVIRLNNARVEKFEKKVGSKTSISFVNSNMLHLCARRTECFCHPYGANVPMVMYICQPAHFLDYTVCNTSHKAPLLVTDPRFDMLCARIVKYYSLKRFVEETGKALEEWSSAHDGALFHYSSGMQAVMLALGICDRVSIFGFGKSASAKHHYHTNQKAELHLHDYEAEYAFYRDLVVGHTTIPFLSDKFRIPPVVLYQ 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0350 495 Gene3D Glycosyl transferase family 29 206 478 IPR038578 -
Lele29g0350 495 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 108 495 - -
Lele29g0350 495 Pfam Glycosyltransferase family 29 (sialyltransferase) 254 473 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0350 Lele-ChrLele29 2145393 2147032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0350 270 439 Glycosyltransferase AT1G08660 30.857 1.12e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0350 29 2145393 2147032 Lele31g1190 31 18338725 18340005 hybridization
Lele29g0350 29 2145393 2147032 Lele32g0335 32 2094226 2095503 hybridization