Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1057 ATGTTCTCGGAGAGAGACAAAGATGGATCCGGCGCTCTTAACTTCAAGATCTCTAGTTTATTGCCACATTTAGCAATACCGACTTGTTGTTCCGTTAAGCACGCCTTACTGATGAAGCGTTCGATTCGACCGCTGTTTGGAGTTCTAATCGTCGTCGTCTTCGTCGCCACTCTCAGCTGCAGAACCTTTGTTAGGAGAGGCTTATTGTCCATTGAGCTGGAGAGCAGAGTATGGGTTCAAGTTCCGTCAGCACCACCGTTGAACGCGACGCTGCTAAAATACGCCGCCATCGACATCGGAGAAGAGAAGTCGAAGCAAGAAATCCAGCAACTTCTCGATGGAAACTTTGCAAGTCAAGCCCGGCACCGTACGTTTGTCTCTTGGCGTAGATTCATTCACCATGAGATCACTGAGAAGGACCCTAGGAGACTACCTGCAACGATACGCTCTCCGTTGTTTTATAGGTATTGGCTAGATTTCCGAAAGGTTTTGAACGATTGGGCCAGAAAAAAGAGGTTTCAGCCTGGTATTATGTCCGATTTAACGCGGCTAGTGAAGCTTCCGATCGATAGGCACAATGGATTGGCGGGTTCGGACCGGCCATACTCGTCTTGTGCGGTGGTTGGCAACAGTGGGATTTTGCTGAACAGCGACTATGGGAAGCTCATTGATAGCCATGAAGCAGTTATCCGTTTGAACAATGCAAGGGTTGAGAAGTTTGAGAAGAAAGTGGGGTCTAAAACAAGCATTTCATTCGTAAATAGCAACATTTTGCATCTCTGTGCGAGGAGGACAGAATGCTTTTGCCACCCATATGGAGCTAATGTGCCAATGGCTATGTACATTTGCCAGCCAGCTCATTTCTTGGATTATTCGGTTTGCAATTCCTCTCACAACGCACCATTGTTGGTCACCGATCCGCGGTTCGATATGCTGTGTGCTCGGATTGTGAAGTACTACTCCTTGAAGAGGTTTGTGGAGGAGACAGGGAAGGCTTTGGAAGAATGGAGCTCTGCACATGATGGTTCTCTATTTCATTACTCTTCTGGTATGCAAGCAGTTATGTTAGCTTTAGGAATCTGTGATAGAGTCAGTATATTTGGGTTTGGCAAGTCTGCCTCAGCTAGGCATCATTATCATACGAATCAGAAGGCTGAGCTTCAGTTGCATGACTATGAAGCAGAATATGCGTTTTACAGGGACCTGGTTGATGGACATAGAGCAATACCTTTTCTCTCGGACAAATTCAAGATTCCACCCGTTGTGTTTTATCAATGA 1278 0.4632 MFSERDKDGSGALNFKISSLLPHLAIPTCCSVKHALLMKRSIRPLFGVLIVVVFVATLSCRTFVRRGLLSIELESRVWVQVPSAPPLNATLLKYAAIDIGEEKSKQEIQQLLDGNFASQARHRTFVSWRRFIHHEITEKDPRRLPATIRSPLFYRYWLDFRKVLNDWARKKRFQPGIMSDLTRLVKLPIDRHNGLAGSDRPYSSCAVVGNSGILLNSDYGKLIDSHEAVIRLNNARVEKFEKKVGSKTSISFVNSNILHLCARRTECFCHPYGANVPMAMYICQPAHFLDYSVCNSSHNAPLLVTDPRFDMLCARIVKYYSLKRFVEETGKALEEWSSAHDGSLFHYSSGMQAVMLALGICDRVSIFGFGKSASARHHYHTNQKAELQLHDYEAEYAFYRDLVDGHRAIPFLSDKFKIPPVVFYQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1057 425 Coils Coil 382 402 - -
Lele30g1057 425 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 38 425 - -
Lele30g1057 425 Gene3D Glycosyl transferase family 29 105 408 IPR038578 -
Lele30g1057 425 Pfam Glycosyltransferase family 29 (sialyltransferase) 183 404 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1057 Lele-ChrLele30 13837164 13838441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1057 200 369 Glycosyltransferase AT1G08660 31.429 4.72e-10 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1057 30 13837164 13838441 Lele31g1190 31 18338725 18340005 hybridization
Lele30g1057 30 13837164 13838441 Lele32g0335 32 2094226 2095503 hybridization