Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0331 ATGGAGCTGGGAAGTATACTCCAGTTTCTTCAGGACAAGACCATCTTAATCACTGGTGCCACTGGCTTTCTAGCCAAAATTCTGTTGGAGAAGATACTGAGGGTTCAGCCAAATGTGAAGAAAGTTTTTCTTCTTTTAAGAGCAGCAGACACCAAATCTGCCACCCATCGCCTGCACAATGAGATCATAGGGAAGGACTTGTTTAAATTGCTGAAGGAGAAATTGGGTTCAAACTTTAATTCTTTTGTTTCCGAAAAGTTGGTTCTGGTTCCTGGGGACCTAAGTTGCGAAGACCTGGGCTTGAAGGATTCCATCTTAAGGGAAGAGATCCTCGGTCAAACTGATGTTATCGTTAACTTAGCTGCAACGACTAATTTTGATGAGAGATATGATATTGCTTTAAGACTGAACACATTCGGAACTAAGTATGTCATGAGTTTCGCCAAGAACTGTGTTAAACTCAAGGTTCTTGTCCACGTATCAACAGCTTATGTATCTGGGGAGAAAGCAGGGCTGATATTAGAGACACCGTATCACTTGGGTGATTCACTTAATGGAGTACCTGGTTTAGACATCTATGTGGAGAACAAAGTGATTCAAGACAAATTGAATGAGCTACGTGAAGAGAGAGCAAGCCCAGATAAAGTTAAAATGGCCATGAAGGACTTAGGTATTGCCAGGGCAAAGGTATACGGATGGCCAAACACATACGTGTTCACAAAGGCAATGGGAGAAATGGTAGTGGAAGATATGAAAGGCAACATGCCCGTTGTCATTGTTCGTCCCACCATTGTTACCAGTACCCTCAAAGAACCCTTCCCTGGTTGGGCCGAAGGTATCAGGACGATTGACAGTTTAGCTGTGGCATATGGGAAAGGAAAGTTGACATGCTTCCTTGGAGATTTGGAGTCACCTGTGGATGTAATACCGGCGGACATGGTGGTGAATGCGATGCTGGTGGCGATGGCGGCTAACGCAAGGCGACCAAATGATGAAGCGATATATCAGGTGGGTTCGTCGGTGAGGAATCCACTGAGATACCAGAATCTTCAGGACTACGGCTTGAGATACTTCACGGCAAAGCCCTGGATCAACAAAGACGGCAAGCCCATCAAGGTCGGCAAAGTCACCGTCTTGAGCGACATGGCCAGCTTTCGCCGATACTTCTTCATCCGCTACCTCCTCCTCTTGAAGGGATTGGAGCTGGCAAATACGGCGTTTTGCCAGTATTTTCATGATTCCTACACGGAACTCAACAGGAAAATCCAGGTTGTGATGCGCTTGGTCGAAATCTACAGGCCTTATCTGTTCTTCTATGGAGCGTTTGATGATATAAACACAGAGAAGTTGCGAATGGCAGCGAGAGAAGGTGGAGTAGAGACGGATTTGTTTTACTTTGACCCAAAAGACGTCGATTGGGAGCATTATTTTATGAGCATTCATATCCCTGGCATCGTCAAGTACATCTTCAAGTGA 1476 0.4526 MELGSILQFLQDKTILITGATGFLAKILLEKILRVQPNVKKVFLLLRAADTKSATHRLHNEIIGKDLFKLLKEKLGSNFNSFVSEKLVLVPGDLSCEDLGLKDSILREEILGQTDVIVNLAATTNFDERYDIALRLNTFGTKYVMSFAKNCVKLKVLVHVSTAYVSGEKAGLILETPYHLGDSLNGVPGLDIYVENKVIQDKLNELREERASPDKVKMAMKDLGIARAKVYGWPNTYVFTKAMGEMVVEDMKGNMPVVIVRPTIVTSTLKEPFPGWAEGIRTIDSLAVAYGKGKLTCFLGDLESPVDVIPADMVVNAMLVAMAANARRPNDEAIYQVGSSVRNPLRYQNLQDYGLRYFTAKPWINKDGKPIKVGKVTVLSDMASFRRYFFIRYLLLLKGLELANTAFCQYFHDSYTELNRKIQVVMRLVEIYRPYLFFYGAFDDINTEKLRMAAREGGVETDLFYFDPKDVDWEHYFMSIHIPGIVKYIFK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0331 491 Gene3D - 8 371 - -
Lele32g0331 491 Pfam Male sterility protein 17 318 IPR013120 -
Lele32g0331 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 332 IPR036291 -
Lele32g0331 491 CDD FAR_C 418 490 IPR033640 -
Lele32g0331 491 Pfam Male sterility protein 393 491 IPR033640 -
Lele32g0331 491 CDD FAR-N_SDR_e 13 362 - -
Lele32g0331 491 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 491 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0331 Lele-ChrLele32 2061575 2065429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0331 110 490 Acyl Lipid Metabolism Gene Families AT4G33790 59.318 2.31e-174 493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0343 29 2080684 2084465 Lele32g0331 32 2061575 2065429 hybridization
Lele30g1062 30 13862865 13874103 Lele32g0331 32 2061575 2065429 hybridization