Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1062 ATGGTCACACTTAATCAAGAACAGGGACTTCTGATCATCCAACTATATTTTGCATTATTCCCTCATAGTCTGTTCGCTCCTTCTGGAACGTCACTTTGGTGCCTCCCTCCTTCTCTCATCACTTCTTCTCCAATGGAGTTGGGAAGTATACTCCACTTTCTTCAGGACAAGACCATCTTAATCACTGGTGCCACTGGCTTTCTAGCCAAAATTCTGTTGGAGAAGATACTGAGGGTTCAGCCAAATGTGAAGAAAGTTTTTCTTCTTTTAAGAGCACAAAACACCAAATCTGCCACCCATCGCCTGCACAATGAGATCATAGGGAAGGACTTGTTTAAATTGCTGAAGGAGAAATTGGGTTCAAACTTTAATTCCTTTGTTTCCGAAAAGTTGGTTCTGGTTCCTGGGGACATAAGTTGCGAAGACCTGGGCTTGAAGGATTCCATCTTAAGGGAAGAGATTCTCGGTCAAACTGATGTTATCGTTAACTTAGCTGCAACTACTAATTTTGATGAGAGATATGATATTGCTTTAAGACTGAACACATTCGGAACTAAGTATGTCATGAGTTTCGCCAAGAACTGTGTTAAACTCAAGGTTCTTGTCCACGTATCAACAGCTTATGTATCTGGGGAGAAAGCAGGGCTGATATTAGAGACACCATATTACTTGGGTGATTCACTTAACGGAGTACCTGGTTTAGACATCGATGTGGAGAACAAAGTGATTCAAGACAAATTGAATGAGCTACGTGAAGAGAGAGCAAGCCCAGATGAAGTGAAAATGGCCATGAAGGACTTAGGTGTTGCCAGGGCAAAGGTATACGGATGGCCAAACACTTACGTGTTCACAAAGGCAATGGGAGAAATGGTAGTGGAAGATATGAAAGGCAACATGCCCGTTGTCATTGTTCGTCCCACAATTGTTACCAGTACCCTCAAAGAACCCTTCCCTGGTTGGGCCGAAGGTGTCAGGACGATTGACAGTTTAGCTGTGGCATATGGGAAAGGAAAATTGACATGCTTCCTTGGAGATTTGGAGTCACCTGTGGATGTGATACCGGCGGACATGGTGGTGAATGCGATGCTGGTGGCGATGGCGGCTAATGCAAGGCAACCAAATGATGAAGCGATATATCAGGTGGGTTCGTCGGTGAGAAATCCATTGAGATACCACAATCTTCAGGACTACGGCTTGAGATACTTCACGGCAAAGCCCTGGATCAACAAAGACGGCAAGCCCGTCAAGGTCGGCAAAGTCACCGTCTTGAACGACATGGCCAGCTTTCGCCGATACTTCTTCATCCGCTACCTCCTCCTCTTGAAGGGATTGGAGCTGGCAAATACGGCGTTTTGCCAGTATTTTCATGATTCCTACACGGAACTCAACAGGAAAATCCAGATTGTGATGCGCTTGGTCGAAATCTACAGGCCTTATTTGTTCTTCTATGGAGCGTTTGATGATATAAACACAGAGAAGTTGCGAATGGCGGCGAGAGAAGGTGGAGTAGAGACGGATTTGTTTTACTTTGACCCAAAAGACGTCGATTGGGAGCATTATTTTATGAACATTCATATCCCTGGCATCGTCAATGTATATGTTTTTCACATGTCTGCTCTGTCTGCCTGTACCAATTTGATTAGCTTTCCAATTGCTTGGACCACACATTTCACAAGTTTACAACAGTTCCTCAAGGGAAAGACCATATTGGTGACACTGGTGCAATTGGCTTCTTGGCAAAAGTTAGTAAGGATTCAATCAGATTTGAAGAAACTGTATCTTCTTGTAATATCTTCTGACACCGACACTGCTACACGACGCATGCATGATGAGGTTCTACGAGATAAGTGGAACGAAAAGTTTGATTCCATGATATCAGAAAAGGTAGCTGCGACATTTGTTGTCAACTTCGCAGCAGCTACAAAATTTGACGATAGAACACTTGATAGTGTTATCGGGGGCAATGACAAAGGGAAAAAATCATGCTTTCTTGGTCATCCCAAGACCAATATAGATGTGATCTTCCAGGATTCTTATAGCCAAAATGACAAGAAAATCAAGATGGTTGAACTTTACAAACCCTATGTTTTCTTTAGGGCATCGTTTGACGACGCGCACTCAGAAAAATTACGAACATCAGCAAAGATGCTGAAGGATGTTGGATTTGAGTTGGAGTTTGATGCCAAAAGTATCGATTGGAGAGACTATTTCATGAATGTTCACATCCCTGGCCTTGTCAACTACGTCTTGACTTGA 2256 0.4331 MVTLNQEQGLLIIQLYFALFPHSLFAPSGTSLWCLPPSLITSSPMELGSILHFLQDKTILITGATGFLAKILLEKILRVQPNVKKVFLLLRAQNTKSATHRLHNEIIGKDLFKLLKEKLGSNFNSFVSEKLVLVPGDISCEDLGLKDSILREEILGQTDVIVNLAATTNFDERYDIALRLNTFGTKYVMSFAKNCVKLKVLVHVSTAYVSGEKAGLILETPYYLGDSLNGVPGLDIDVENKVIQDKLNELREERASPDEVKMAMKDLGVARAKVYGWPNTYVFTKAMGEMVVEDMKGNMPVVIVRPTIVTSTLKEPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLESPVDVIPADMVVNAMLVAMAANARQPNDEAIYQVGSSVRNPLRYHNLQDYGLRYFTAKPWINKDGKPVKVGKVTVLNDMASFRRYFFIRYLLLLKGLELANTAFCQYFHDSYTELNRKIQIVMRLVEIYRPYLFFYGAFDDINTEKLRMAAREGGVETDLFYFDPKDVDWEHYFMNIHIPGIVNVYVFHMSALSACTNLISFPIAWTTHFTSLQQFLKGKTILVTLVQLASWQKLVRIQSDLKKLYLLVISSDTDTATRRMHDEVLRDKWNEKFDSMISEKVAATFVVNFAAATKFDDRTLDSVIGGNDKGKKSCFLGHPKTNIDVIFQDSYSQNDKKIKMVELYKPYVFFRASFDDAHSEKLRTSAKMLKDVGFELEFDAKSIDWRDYFMNVHIPGLVNYVLT 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1062 751 Pfam Male sterility protein 61 362 IPR013120 -
Lele30g1062 751 Gene3D - 52 415 - -
Lele30g1062 751 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 50 376 IPR036291 -
Lele30g1062 751 CDD FAR_C 684 750 IPR033640 -
Lele30g1062 751 PANTHER MALE STERILITY PROTEIN 2-RELATED 50 532 IPR026055 GO:0080019
Lele30g1062 751 CDD FAR_C 462 535 IPR033640 -
Lele30g1062 751 CDD FAR-N_SDR_e 57 406 - -
Lele30g1062 751 Pfam Male sterility protein 437 531 IPR033640 -
Lele30g1062 751 Pfam Male sterility protein 684 750 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1062 Lele-ChrLele30 13862865 13874103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1062 674 750 Acyl Lipid Metabolism Gene Families AT4G33790 44.048 5.43e-14 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1062 30 13862865 13874103 Lele31g1196 31 18397221 18400134 hybridization
Lele30g1062 30 13862865 13874103 Lele32g0331 32 2061575 2065429 hybridization