Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0307 ATGGTCGAAGCCGAACCCAAATTCTTCATGCCGGACTCAGTCCGCAGCGTGAGTTACGACCTCGCCGGACAGATTAAGCTCATATGGGAAGTGGTCAAAACGCCATTAATTGTCCCACTTCTGAACCTCGGAGTCTACATTTGCTTGGCAATGGCTCTTATGCTCTTCATGGAGAGGCTCTATATGGGAGTCGTCATCATCCTCGTCAAGCTCTTCTGGAAAAAGCCAGAACATCGTTACAGATACGAGCCCATCCAAGACGACGTTGAATTGGGGTCCTCCAATTTCCCCATCGTTCTTGTTCAAATCCCAATGTTCAATGAAAAAGAGGTTTACAAGGTCTCCATTGGAGCAGCTTGTGGTCTTTCATGGCCTTCGGATCGTCTGGTGATCCAAGTCCTCGATGATTCTACTGACCCTGCTATCAAGCAACTGGTGGAGCAAGAGTGCCTAAGATGGGCGAGCAAGGGAATAAACATAACGTATCAAATTAGAGAGAACAGAACGGGATACAAAGCAGGAGCGCTGAAAGAAGGGCTGAAGCGAAACTACGTGAAACACTGCGAGTACGTGGCCATTTTCGACGCCGACTTCCGCCCGGAGCCGGACTTTCTCCGGCGAGCCATTCCCTTCTTGGATGGCAACCCGGACCTGGCTTTGGTTCAAGCACGCTGGAGATTCGTGAATGCGGATGAATGCCTATTGACAAGAATGCAAGAGATGTCTCTGGATTACCATTTCACAGTGGAGCAAGAAGTTGGGTCAGCTACTCATGCCTTCTTTGGTTTCAACGGCACAGCAGGTGTTTGGAGAATTGCCGCTATCAATGAAGCAGGAGGTTGGAAAGACAGAACAACTGTGGAGGACATGGATCTTGCTGTTCGTGTTAGCCTCAGAGGTTGGAAATTTCTCTACCTTGGTGACCTCCAGGCAAAAAGTGAGCTTCCCAGTACTTTAAGGGCCTTCCGTTTTCAGCAACATCGATGGTCTTGTGGTCCTGCTAATCTTTTCCGCAAAATGGTGATGGAGATTGTGAGGAACAAGAAAGTGAAGTTTTGGAAGAAAGTATATGTGATATATAGCTTCTTCTTTGTACGTAAAATCATAGCCCATATGGTGACCTTCTTCTTCTACTGTGTGGTTCTTCCCCTCACAATTTTGGTCCCTGAGGTTCATGTTCCAATTTGGGGAGCTGTTTACATTCCTTCCATCATCACCATCCTCAACTCAGTGGGAACTCCAAGGTCCATTCACTTGTTGTTCTACTGGATCCTTTTTGAGAATGTCATGTCTCTGCATCGTACCAAGGCAACTTTTATAGGTCTGCTTGAGTATGGAAGAGCTAATGAGTGGGTTGTCACTGCAAAACTTGGAGACTCTGTGAATAGTAAGAACAAAGCAGATTCTGCTAAGAACAAGACAAATGTCACCAAACCTGTTAAAAAACTCAGACTCAAATTTGCTGAAAGGTTTAATTTACTAGAGCTGGGATTTGCAGTGTTCCTCTTCTTTTGTGGGTGCTATGATTTTGTAAATGGGAAGCACAACTACTTTGTGTACCTCTTCCTTCAGACCATAACCTTTTCCATTGTTGGATTTGGTTATGTTGGCACCATTGTGTGA 1623 0.4578 MVEAEPKFFMPDSVRSVSYDLAGQIKLIWEVVKTPLIVPLLNLGVYICLAMALMLFMERLYMGVVIILVKLFWKKPEHRYRYEPIQDDVELGSSNFPIVLVQIPMFNEKEVYKVSIGAACGLSWPSDRLVIQVLDDSTDPAIKQLVEQECLRWASKGINITYQIRENRTGYKAGALKEGLKRNYVKHCEYVAIFDADFRPEPDFLRRAIPFLDGNPDLALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRVSLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTAKLGDSVNSKNKADSAKNKTNVTKPVKKLRLKFAERFNLLELGFAVFLFFCGCYDFVNGKHNYFVYLFLQTITFSIVGFGYVGTIV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0307 540 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Lele32g0307 540 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 365 IPR029044 -
Lele32g0307 540 CDD CESA_CaSu_A2 97 333 - -
Lele32g0307 540 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Lele32g0307 540 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 538 - -
Lele32g0307 540 Pfam Glycosyl transferase family group 2 190 399 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0307 Lele-ChrLele32 1922398 1926077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0307 1 540 Miscellaneous Gene Families AT5G22740 79.630 0.0 900
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0321 29 1957042 1961042 Lele32g0307 32 1922398 1926077 hybridization
Lele30g1084 30 14009712 14014190 Lele32g0307 32 1922398 1926077 hybridization