Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1084 ATGCCGGACTCAGTCCGCAGCGTGAGTTACGACCTCGCCGGACAGATTAAGCTCATATGGGAAGTGGTCAAAACGCCATTAATTGCCCCACTTCTGAACATCGGAGTCTACATTTGCTTGGCAATGGCTCTTATGCTCTTCATGGAGAGGCTCTATATGGGAGTCGTCATCATCCTCGTCAAGCTCTTCTGGAAAAAACCAGAACATCGTTACAGATACGAGCCCATCCAAGACGACGTTGAATTGGGGTCCTCCAATTTCCCCGTCGTTCTTGTTCAAATCCCAATGTTCAATGAAAAAGAGGTTTACAAGGTCTCCATTGGAGCAGCTTGTGGTCTTTCATGGCCTTCGGATCGTCTGGTGATCCAAGTCCTCGATGATTCTACTGACCCTGCTATCAAGCAACTGGTGGAGCAAGAGTGCCTGAGATGGGCGAGCAAGGGAATAAACATAACGTATCAAATTAGAGAGAACAGAACGGGATACAAAGCAGGAGCGCTGAAAGAAGGGCTAAAGCGAAGCTACGTGAAACACTGCGAGTACGTGGCCATTTTCGACGCCGACTTCCACCCGGAGCCGGACTTTCTCCGGCGAGCCATTCCCTTCTTGGATGGCAACCCGGACCTGGCTCTGGTTCAAGCACGCTGGAGATTCGTGAATGCGGATGAATGTCTATTGACAAGAATGCAAGAGATGTCTCTGGATTACCATTTCACAGTGGAGCAAGAAGTTGGCTCAGCTACTCATGCCTTCTTTGGTTTCAACGGCACAGCAGGTGTTTGGAGAATTGCAGCTATCAATGAATCAGGAGGTTGGAAAGACAGAACAACTGTGGAGGACATGGATCTTGCTGTTCGTGTTAGCCTCAGAGGTTGGAAATTTCTCTACCTTGGTGACCTCCAGGCAAAAAGTGAGCTTCCCAGTACTTTAAGGGCCTTCCGTTTTCAGCAACATCGATGGTCTTGTGGTCCTGCTAATCTTTTCCGCAAAATGGTGATGGAGATTGTGAGGAACAAGAAAGTGAAGTTTTGGAAGAAAGTGTATATGATATATAGCTTCTTCTTTGTACGTAAAATCATAGCCCATATGGTGACCTTCTTCTTCTACTGTGTCGTTCTTCCCCTCACAATTTTGGTCCCTGAGGTTCATGTTCCAATTTGGGGAGCTGTTTACATTCCTTCCATCATCACCATCCTCAACTCAGTGGGAACTCCAAGGTCCATTCACTTGTTGTTCTACTGGATCCTTTTTGAGAATGTCATGTCTCTGCATCGTACCAAGGCAACTTTTATAGGTCTGCTTGAGTATGGAAGAGCTAATGAGTGGGTTGTCACTGCAAAACTTGGAGACTCTGTGAATAGTAAGAACAAAGCAGATTCTGCTAAGAACAAGACAAATGTCACCAAACCTGTTAAAAAACCCAGACTCAAATTTGCTGAAAGGTTTAATTTACTAGAGCTGGGATTTGCAGTGTTCCTCTTCTTTTGTGGATGCTATGATTTTGTAAATGGGAAGCACAACTACTTTGTGTACCTCTTCCTTCAGACCATAACCTTTTCCATTGTTGGATTTGGTTATGTTGGCACCATTGTGTGA 1596 0.4561 MPDSVRSVSYDLAGQIKLIWEVVKTPLIAPLLNIGVYICLAMALMLFMERLYMGVVIILVKLFWKKPEHRYRYEPIQDDVELGSSNFPVVLVQIPMFNEKEVYKVSIGAACGLSWPSDRLVIQVLDDSTDPAIKQLVEQECLRWASKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFHPEPDFLRRAIPFLDGNPDLALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINESGGWKDRTTVEDMDLAVRVSLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYMIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTAKLGDSVNSKNKADSAKNKTNVTKPVKKPRLKFAERFNLLELGFAVFLFFCGCYDFVNGKHNYFVYLFLQTITFSIVGFGYVGTIV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1084 531 SUPERFAMILY Nucleotide-diphospho-sugar transferases 88 357 IPR029044 -
Lele30g1084 531 CDD CESA_CaSu_A2 88 324 - -
Lele30g1084 531 FunFam Glucomannan 4-beta-mannosyltransferase 9 79 307 - -
Lele30g1084 531 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 307 IPR029044 -
Lele30g1084 531 Pfam Glycosyl transferase family group 2 181 390 IPR001173 -
Lele30g1084 531 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 13 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1084 Lele-ChrLele30 14009712 14014190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1084 1 531 Miscellaneous Gene Families AT5G22740 79.737 0.0 891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1084 30 14009712 14014190 Lele31g1221 31 18546088 18549760 hybridization
Lele30g1084 30 14009712 14014190 Lele32g0307 32 1922398 1926077 hybridization