LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele32g0293	ATGCAGCCCAATTTGTTCCCCTTTGGAAGCTTTCAGGGAAATCCGTTCATATTCAATGGTGATTTGAGTGAGGGGTTTGAGAGCTCTAGGGTTTTCTTCTTAGTTCCTTCCTTTCTCTTCCAGGGAGGGGGAATGGATTTGTCCAAGGTCGGAGAAAAGATCCTGAGCTCCGTTAGGTCTGCGAGATCGCTTGGACTGCTCCCCTCTGTTTCTGATCGGCCGGAGGTTCCAGCTAGAGCTGCTGCGGCTGCGGCTGTTGCTCGTGCTCTCGCAGGATTGCCTCCTCATCAGCGGTATAGTCTCTCATCAAGTTCAGAAGAACTGAGTTCTATATATGGAAGCAGAAGTCACGGTCCAGAAGTAGAGGAGCTTGAGGATAAATTCTATGAGGAGGATTTTGATCCAGTCAAGTATGTTTTAGAGCATGCTCCTGCTGAAGAAAATGAGCTTGCACACTTTGAGAAGCAGGCCGCTCTTAGATTGGCACAGTTGGATAGAGTAGCAGAGTGTTTATCTCGCCACGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGGGAACTGGAAAAAGACTTGAGGATTGCCAATGTCATCTGCATGAATGGAAGAAGACACTTGACCTCATCTATGAATGAAGTTTCAAGGGATCTTATTGTAAATTCTTATTCCAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAGTTTTGACTGAGCTTCAACGTGCATTGGACATGCAATCAACACTTGAATCACTTGCTGAGGAGGGGAATTATTGCAAGGCGTTTCAAGTTCTATCCGAGTTTCTGCAACTCTTAGATAGTTTGTCAGAACTTTCAGCAATACAAGGGATGACTCGTGGTGTGGAGGTTTGGCTGGGAAAAACTCTACAAAAACTGGATGCTCTTTTGTTGGGAGTGTGTCAGGAATTCAAGGAAGATAGCTATATAACTGTAATTGATGCCTACGCATTAATCGGGGATGTCACTGGTCTGGCTGAAAAGATACAAAGTTTCTACATGCAAGAAGTTATCTCAGAAACCCACTCTGTGTTGAAAGCTGTTGTGTATGAGGATGAAGAGGCACCTTCGCAAAATAGTAGGTTCACTTACAGTGACTTATGCCTTCAAATATCCGAATCTAAGTTTAGGCCTTGCTTATTAAGAACATTAGGTGTTCTATTTGAGCTTATGCATTCATACCATGAAATTATGGAGTTTCAGCTGGATAGGCAGGGCGCAGCAGGCCAAATTTCAAATAAAGACGATGATGATGTTTCCTGTAGTACAGGTGGGACTGGGGAGGTTGATGCAGATGTAAGAATCCATTGCATCTCTTTTTCCGGTTCTGGAGATGAAATTCATGATTCATCTTCAAGAGAAGGATCTGAAACAGCCAACTCTACTGCTTTACAATGTACAGATTCTCATGATCCAGTTAATGAGGCAAGAAAGGAGGATAATGCAGTATCGAGCATTGAGTCCCCTTGGTACCATCTGCGCAAAGAAGCTACAGAATTTGCTTCACAGACCCTTAAACGAGGGCGCAAGAATCTTTGGCATCTCACTACTAGCCGCGTTTCAGTATTGCTTTCTTCTGATGCAGCTTGTACCACAAGCATTCACCAATTCTTGAAAAATTATGAGGATCTCAGTGCCTTCATTTTGGCTGGGGAAGCCTTTTGCGGAAGTGAAGCAGTTGAATTTAGGCAGAAGTTGAAGATGGTTTGTGAAAAGTATTTCATAGCTTTTCATCGACAAAACATTCATGCACTCAAAATGGTTTTAGAGAAAGAGATGTGGTTAAAATTACCGCCAGATACAGTGCAAATGATCAGTTTTTCCGGACTAGTTGGTGATGGAGCGCCTTTGATTTCTTTGTCTAACCGCAAATCAATTAACCCCAGTGCAGTTGACTCTGATAAATCAGTAAACTTGGTTCACAGTCACAACAGCTCTAGGAAAAGTGGTTTCTCTTATTGGCTTCAAAATGGAAACCCATTTTTGGAGAAATTATCAACCTCTAGAGAAGGCCACTGCTTCCCCCAATCTAATGAATCAACATATGGTGAACTTGATGGGAATTCGAACAGCAATTTTTATGGTGATAAAGTATCGCCCAGAAAGAAGGATTCCAATCAAATAAATGGTGCTAATTCAACTTCAGATGATGAAAATGAGGATCTTCTGGCAGACTTTATCGATGAGGACAGTCAACTTCCAAGTCGAAGTTCAAAACCCAATCATCCAAGAAGAAAGTCATTACTTTGTAATGATGAAGAAAACACAGCTCAAACTGGTTCTTCTCTTAGTCTTTTAAGATCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTCTTTAAGGGAATTTGCCAGTTATTTGCGATTTTTTTCAATTTTGTATATGAAACATTTGGTCAGCATAACACTAGTTTCAATGGAAAAGGTTCAACTGATTCTCTTAACTATCGGCTAAGGACAGCCTTATCTAAAATAACACAAGATTGCGATCAGTGGATAAAGCCCCTGTCATCTTCACCTACTTCATCATTTGTACGTTCAGAGGTAACACCTGCTGGCCCTCCCAGCACAAATTTGGGCAACTCCGCAGTGACATCCTTGGGTCTTAAGGAAAGATGCGCGGCTGTTGATAGTATATCACTTGTTGCTCGAATATTGAATAGATCCAAAGCTCATCTCCAATCAATGCTTTTGCAAAGTAATGCTACTATACTTGAGGATTTCTATCAGCATCTGGTGGATGCCGTACCAGATCTTGCAGAGCATGTTCATAGGACAACGGCAAGACAACTACTGCACATCAATGGGTATGTTGAACGTGTTGCCAATTGTAGATGGGAAGTAAAAGAGCTTGGGCTAGAGCATAATGGGTATGTGGATTTGTTGCTTGGAGAATTTAAGCACTACAAAACGCGTCTTGCTCATGGGGGAATTCGTCTAGAGATTCAAGACTTACTATTAGAATATGGGCTTGAAATTGTGGCGGAAACTCTTGTAGAAGGACTTTCACGGGTAAAGAGATGTAGTGACGAAGGGCGAGCTTTAATGTCATTGGATCTGCAGGTTTTAATCAATGGGCTGCATCATTTTGTGTCCATGAATGTGAAGCCCAAGCTACAAATGGTTGAAACCTTCATTAAGGCTTACTATCTTCCAGAGACAGAATTTGTGCACTGGGCCCGCGCACACCCGGAATACACTAAAAGTCAGATTATTGGGTTGATAAACCTTGTTGCTTCGATGAAAGGTTGGAAGAGAAAAACCAGGTTGGAGATCTTGGAAAAGATTGAGTGA	3345	0.4185	MQPNLFPFGSFQGNPFIFNGDLSEGFESSRVFFLVPSFLFQGGGMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRSHGPEVEELEDKFYEEDFDPVKYVLEHAPAEENELAHFEKQAALRLAQLDRVAECLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPVLTELQRALDMQSTLESLAEEGNYCKAFQVLSEFLQLLDSLSELSAIQGMTRGVEVWLGKTLQKLDALLLGVCQEFKEDSYITVIDAYALIGDVTGLAEKIQSFYMQEVISETHSVLKAVVYEDEEAPSQNSRFTYSDLCLQISESKFRPCLLRTLGVLFELMHSYHEIMEFQLDRQGAAGQISNKDDDDVSCSTGGTGEVDADVRIHCISFSGSGDEIHDSSSREGSETANSTALQCTDSHDPVNEARKEDNAVSSIESPWYHLRKEATEFASQTLKRGRKNLWHLTTSRVSVLLSSDAACTTSIHQFLKNYEDLSAFILAGEAFCGSEAVEFRQKLKMVCEKYFIAFHRQNIHALKMVLEKEMWLKLPPDTVQMISFSGLVGDGAPLISLSNRKSINPSAVDSDKSVNLVHSHNSSRKSGFSYWLQNGNPFLEKLSTSREGHCFPQSNESTYGELDGNSNSNFYGDKVSPRKKDSNQINGANSTSDDENEDLLADFIDEDSQLPSRSSKPNHPRRKSLLCNDEENTAQTGSSLSLLRSMDKYARLMQKLEVVNVEFFKGICQLFAIFFNFVYETFGQHNTSFNGKGSTDSLNYRLRTALSKITQDCDQWIKPLSSSPTSSFVRSEVTPAGPPSTNLGNSAVTSLGLKERCAAVDSISLVARILNRSKAHLQSMLLQSNATILEDFYQHLVDAVPDLAEHVHRTTARQLLHINGYVERVANCRWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRLEIQDLLLEYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAYYLPETEFVHWARAHPEYTKSQIIGLINLVASMKGWKRKTRLEILEKIE	1114

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele32g0293	1114	MobiDBLite	consensus disorder prediction	454	491	-	-
	Lele32g0293	1114	MobiDBLite	consensus disorder prediction	682	765	-	-
	Lele32g0293	1114	MobiDBLite	consensus disorder prediction	682	706	-	-
	Lele32g0293	1114	Pfam	Vacuolar-sorting protein 54, of GARP complex	121	410	IPR019515	-
	Lele32g0293	1114	PANTHER	UNCHARACTERIZED	45	1114	IPR040047	GO:0032456\|GO:0042147\|GO:1990745
	Lele32g0293	1114	Pfam	Protein of unknown function C-terminus (DUF2451)	884	1114	IPR019514	-
	Lele32g0293	1114	MobiDBLite	consensus disorder prediction	464	479	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele32g0293	Lele-ChrLele32	1828891	1840434	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele29g0312	29	1863479	1875700	Lele32g0293	32	1828891	1840434	hybridization
	Lele30g1099	30	14099818	14111448	Lele32g0293	32	1828891	1840434	hybridization