LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele30g1099	ATGCAGCCCAATTTGTTCCCCTTTGGAAGCTTTCAGGGAAATCCGTTCATATTCAATGGTGATTTGAGTGAGGGGTTTGAGAGCTCTAGGGTTTTCTTCTTAGTTCCTTCCTTGCTCTTCCAGGGAGGGGGAATGGATTTGTCCAAGGTCGGAGAGAAGATCCTGAGCTCGGTTAGGTCTGCGAGATCGCTTGGACTGCTCCCCTCTGTTTCTGATCGGCCCGAGGTTCCAGCTAGAGCTGCTGCCGCTGCGGCTGTTGCTCGTGCTCTCGCAGGATTGCCTCCTCATCAGCGGTATAGTCTCTCATCAAGTTCAGAAGAACTGAGTTCTATATATGGAAGCAGAAATCAAGGTCCAGAAGTAGAGGAGCTTGAGGATGAATTCTATGAGGAGGATTTTGATCCAGTCAAGTATGTTTTAGAGCATGCTCCTGCTGAAGAAAATGAGCTTGCTCATTTTGAGAAGCAGGCCGCTCTTAGATTGGCACAGTTGGATAGAGTAGCAGAGTGTTTATCTCGCCACGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGGGAACTGGAAAAAGACTTGAGGATTGCCAATGTCATCTGCATGAATGGAAGAAGACACTTGACCTCATCTATGAATGAAGTTTCAAGGGATCTTATTGTAAATTCTTATTCCAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAGTTTTGACTGAGCTTCAACGTGCATTGGACATGCAATCAACACTTGAATCACTTGCTGAGGAGGGGAATTATTGCAAGGCGTTTCAAGTTCTATCCGAGTTTCTGCAACTCTTAGATAGTTTGTCAGAACTTTCAGCAATACAAGAGATGACTCGTGGTGTGGAGGTTTGGCTGGGAAAAACTCTACAAAAACTGGATGCTCTTTTGTTGGGAGTGTGTCAGGAATTCAAGGAAGATAGCTATATAACTGTAATTGATGCCTACGCATTAATCGGGGATGTCATTGGTCTGGCTGAAAAGATACAAAGTTTCTACATGCAAGAAGTTATCTCAGAAACCCACTCTGTGTTGAAAGCTGTTGTGTATGAGGATGAGGAGGCACCTTCGCAATATAGTAGGTTCACTTACAGTGACTTATGCCTTCAAATATCCGAATCTAAGTTTAGGCCTTGCTTATTAAGAACATTAGCTGTTCTATTTGAGCTTATGCATTCATACCATGAAATTATGGAGTTTCAGCTGGATAGGCAGGGCGCAGCAGGCCAAACTTCAAATAAAGACAATGATGATGTTTCCTGTAGTAGAGGCAGGGCTGGGGAGGTTGATGCAGATGTAAGAATCCGTTGCATCTCTTTTTCCGGTTCTGGAGATGAAATTCATGGTTCATCTTCAAGAGAAGAATGTGAAACAGCCAGCTCACTGGTTGAAACTTCCAACTCTACTGCTTTACAATGTACAGATTCTCATGATCCAGTTAATGAGGCAAGAAATGAGGATAATGCAGTATCGAGCATTGAGTCCCCTTGGTACCATCTGCGCAAAGAAGCTACAGAATTTGTTTCACAGACCCTTAAACGAGGGCGCAAGAATCTTTGGCATCTCACTACTAGTCGCGTTTCAGTATTGCTTTCTTCTGATGCAGCTTGTACCACAAGCATTCACCAATTCTTGAAAAATTATGAGGATCTCAGTGTCTTCATTTTGGCTGGGGAAGCCTTTTGCGGAAGTGAAGCAGTTGAATTTAGGCAGAAGTTGAAGATGGTTTGTGAAAAGTACTTCATAGCTTTTCATCGACAAAACATTCATGCACTCAAAATGGTTTTGGAGAAAGAGACGTGGTTAAAATTACCGCCAGATACAGTGCAAATGATCAGTTTTTCCGGACTAGTTGGTGATGGAGCACCTTTGATTTCTTTGTCTAACCGCAAATCAATTAACCCCAGTGCAATTGACACTGATAAATCAGTAAACTTGGTTCACAGTCACAACGGCTCTAGGAAAAGTGGTTTCTCTTATTGGCTTCAAAATGGAAACCCATTTTTGCAGAAATTATCAACCTCTAGAGAAGGCCACTGCTTCCCCCAATCTAATGGATCAACATATGGTGAACTTGATGGGAATTCGAACAGCAATTTTTATGGTGATAAAGTATCGCCCAGAAAGAAGGATTCCAGTCAAATAAATGGTGCTAATTCAACTTCAGATGATGAAAATGAGGATCTTCTGGCAGACTTTATCGATGAGGACAGTCAACTTCCAAGTCGAAGTTCAAAACCCAATCATCCAAGAAGAAAGTCATTACTTTGTAATGATGAAGAAAACACAGCTCAAACTGGTTCTTCTCTTAGTCTTTTAAGATCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTCTTTAAGGGAATTTGCCAGTTATTTGAGATTTTTTTCAATTTTGTATATGAAACATTTGGTCAGCATAACACTAGTTTCAATGGAAAAGGTTCGACTGATTCTCTTAACTATCGGCTAAGGACGGCCTTATCTAAGATAACACAAGATTGCGATCAGTGGATAAAGCCCCTGTCATCTTCACCTACTTCATCATTTGTACGTTCAGAGTTAACACCTTCTGGCCCTCCCAGCACAAATTTGGGCAACTCCGCAGTGACATCTTTGGGTCTTAAGGAAAGATGTGTTGCTGTTGATACTATATCACTTGTTGCTCGAATATTGAATAGATCCAAAGCTCATCTCCAATCAATGCTTTTGCAAAGTAATGCTACTATACTTGAGGATTTCTATCAGCATCTGGTGGATGCCGTACCAGATCTTGCAGAGCATATTCATAGGACAACGGCAAGACAACTACTGCACATCAATGGGTATGTTGAACGTGTTGCCAATTGTAGATGGGAAGTAAAAGAGCTTGGGCTAGAGCATAATGGGTATGTGGATTTGTTGCTTGGAGAATTTAAGCACTACAAAACGCGTCTTGCTCATGGGGGAATTCGTGTAGAGATTCAAGACCTACTATTAGAATATGGGCTTGAAATTGTGGCGGAAACTCTTGTAGAAGGACTTTCACGGGTAAAGAGATGTAGTGACGAAGGGCGAGCTTTAATGTCATTGGATCTGCAGGTTTTAATCAATGGACTGCATCATTTTGTGTCCATGAATGTGAAGCCCAAGCTACAAATGGTTGAAACCTTCATTAAGGCTTACTATCTTCCAGAGACAGAATTTGTGCACTGGGCCCGCGCACACCCGGAATACACTAAAAGTCAGATTATTGGGTTGATAAACCTTGTTGCTTCGATGAAAGGTTGGAAGAGAAAAACCAGGTTGGAGATCTTGGAAAAGATTGAGTGA	3366	0.4177	MQPNLFPFGSFQGNPFIFNGDLSEGFESSRVFFLVPSLLFQGGGMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRNQGPEVEELEDEFYEEDFDPVKYVLEHAPAEENELAHFEKQAALRLAQLDRVAECLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPVLTELQRALDMQSTLESLAEEGNYCKAFQVLSEFLQLLDSLSELSAIQEMTRGVEVWLGKTLQKLDALLLGVCQEFKEDSYITVIDAYALIGDVIGLAEKIQSFYMQEVISETHSVLKAVVYEDEEAPSQYSRFTYSDLCLQISESKFRPCLLRTLAVLFELMHSYHEIMEFQLDRQGAAGQTSNKDNDDVSCSRGRAGEVDADVRIRCISFSGSGDEIHGSSSREECETASSLVETSNSTALQCTDSHDPVNEARNEDNAVSSIESPWYHLRKEATEFVSQTLKRGRKNLWHLTTSRVSVLLSSDAACTTSIHQFLKNYEDLSVFILAGEAFCGSEAVEFRQKLKMVCEKYFIAFHRQNIHALKMVLEKETWLKLPPDTVQMISFSGLVGDGAPLISLSNRKSINPSAIDTDKSVNLVHSHNGSRKSGFSYWLQNGNPFLQKLSTSREGHCFPQSNGSTYGELDGNSNSNFYGDKVSPRKKDSSQINGANSTSDDENEDLLADFIDEDSQLPSRSSKPNHPRRKSLLCNDEENTAQTGSSLSLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFNFVYETFGQHNTSFNGKGSTDSLNYRLRTALSKITQDCDQWIKPLSSSPTSSFVRSELTPSGPPSTNLGNSAVTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNATILEDFYQHLVDAVPDLAEHIHRTTARQLLHINGYVERVANCRWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRVEIQDLLLEYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAYYLPETEFVHWARAHPEYTKSQIIGLINLVASMKGWKRKTRLEILEKIE	1121

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele30g1099	1121	MobiDBLite	consensus disorder prediction	862	881	-	-
	Lele30g1099	1121	MobiDBLite	consensus disorder prediction	689	713	-	-
	Lele30g1099	1121	MobiDBLite	consensus disorder prediction	689	772	-	-
	Lele30g1099	1121	Pfam	Protein of unknown function C-terminus (DUF2451)	891	1121	IPR019514	-
	Lele30g1099	1121	Pfam	Vacuolar-sorting protein 54, of GARP complex	121	410	IPR019515	-
	Lele30g1099	1121	PANTHER	UNCHARACTERIZED	45	1121	IPR040047	GO:0032456\|GO:0042147\|GO:1990745

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele30g1099	Lele-ChrLele30	14099818	14111448	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele30g1099	30	14099818	14111448	Lele31g1236	31	18649086	18664753	hybridization
	Lele30g1099	30	14099818	14111448	Lele32g0293	32	1828891	1840434	hybridization