LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele29g0312	ATGCAGCCCAATTTGTTCCCCTTTGGAAGCTTTCAGGGAAATCCGTTCATATTCAATGGTGATTTGAGTGAGGGGTTTGAGAGCTCTAGGGTTTTCTTCTTAGTTCCTTTCTTGCTCTTCCAGGGTGGGGGAATGGATTTGTCCAAGGTCGGAGAAAAGATCCTGAGCTCCGTTAGGTCTGCGAGATCGCTTGGACTGCTCCCCTCTGTTTCTGATCGGCCGGAGGTTCCAGCTAGAGCTGCTGCTGCTGCAGCTGTTGCTCGTGCTCTCGCAGGATTGCCTCCTCATCAGCGGTATAGTCTCTCATCAAGTTCAGAAGAACTGAGTTCTATGTATGGAAACAGAAATCATGGTCAAGAAGTAGAGGAGCTTGAGGATGAATTCTATGAGGAGGATTTTGATCCAGTCAAGTATGTTTTAGAGCATGCTCCTGCTGAAGAAAATGAGCTTGCACATTTTGAGAAGCAGGCCGCTCTTAGATTGGCACAGTTGGATAGAGTAGCAGAGTGTTTATCTCGCCATGTTATGGAGCATCATCAAGTTATGGTGAAGGGGATGAATTTGGTCAGGGAACTGGAAAAAGACTTGAGGATTGCCAATGTCATATGTATGAATGGAAGAAGACACTTGACCTCATCTATGAATGAAGTTTCAAGGGATCTTATTGTAAATTCTTATTCCAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAGTTTTGACTGAGCTTCAACGTGCATTGGACATGCAATCAACACTTGAATCACTTGCTGAGGAGGGGAATTACTGCAAGGCATTTCAAGTTCTATCCGAGTTTCTGCAACTCATAGATAGTTTGTCAGAATTTTCAGCAATACAAGAGATGACTCGTGATGTGGAGGTTTGGCTGGGAAAAACTCTACAAAAACTGGATGCTCTTTTGTTGGGGGTGTGTCAGGAATTCAAGGAAGATAGCTATATAACTGTAATTGATGCCTACGCATTAATCGGGGATGTCACTGGTCTGGCTGAAAAGATACAAAGTTTCTACATGCAAGAAGTTATCTCAGAAACCCACTCTGTGTTGAAGGCTGTTGTGTATGAGGATGAGGATGCACCTTCGCAAAATAGTAGGTTCACTTACAGTGACTTATGCCTTCAGATATCTGAATCTAAGTTTAGGCCTTGCTTATTAAGAACATTAGTTGTTCTATTTGAGCTTATGCATTCATACCATGAAATTATGGAGTTTGAGCTGGATAGACAGGACACAGCAGGCCAAACTTCAAATAACGACAATGATGATGTTTCCTGTAGTCCAGGTGGGGCTGGTGAGGTTGATGCGGATGTAAGAATTCGTAACGTCTCTGGAGATGAAATTCATGGTTCATCTTCAAGAGAAGAATCTGAAACAGCCAGCTCACTGGTTGAAACTTCCAACTCTACTGCTTTACCATGTACAGGTTCTCATGATCCAGTTAATGAGGCGAGACAGGAGGATAATGCAACATCGAGCATTGAGTCCCCTTGGTACCATCTGCGCAAAGAAGCTACAGAATTTGTTTCACAGACCCTTAAACGAGGGCGCAAGAATCTTTGGCATCTCACTACTAGCCGCATTTCAGTATTGCTTTCGTCTGATGCAGCTTGTACCACAAGCATTCACCAATTCTTGAAAAATTACGAGGATCTCAATGTCTTCATTTTGGCTGGGGAAGCCTTTTGCGGAAGTGAAGCAGTTGAATTTAGGCAGAAGGTGAAGGTGGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAACATTCATGCACTCAAAATGGTTTTGGATAAAGAGATGTGGTTAAAATTACCGCCAGATACATTGCAAATGATCAGTTTTTCTGGGCTAGTTGGGGATGGAGCACCTTTGATTTCTTTGTCTAACCGCAAATCAGTAAACTTGGTTCACAGCCACAACAGTTCTAGGAAAAGTGGTTTCTCTTATTGGCTTCAAAATGCAAACCCATTTTTGCAGAAATTATCAACCCCTAGAGAAACCCATTGTTTCCCCCAATCTAACGGATCAACATATGGTGAACTTGATGGGAATTCAAACGGCAATTTTTATGGTGATAAAGTCTCGCCCAGAAAGAACGATTCCAGTCAAATGAACGGTGCTAATTCAATTTCAGATGAGGAAAATGAGGATCTTTTGGCAGACTTTATTGATGAGGACAGTCAACTTCCAAGTCGAAGTTCAAAACCCAATCATCCAAGAAGAAAGTCATTAAATTGTAATGACGAAGAAAATTCAGCTCAAACTGGTTCTTCTCTAAGTCTTCTAAGGTCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTCTTTAAGGGAATTTGCCAGTTATTTGAGATTTTTTTCAATTTTTTATATGAAACATTTGGTCATCATAACACTGATTTCCATGGAAAAGGTTCGACAGATTCTCTTAACTATCGGCTAAGGGCCGCCTTATCCAAAATAACACAAGATTGCGATCAGTGGATAAAGCTCCTGTCATCTTCACCTACTTCATCATTTGTACATTCAGAGGTAACACCTGCTGCCCCTCCCAGCACAAATTTGGGCAGCTCCTCAGTGACATCTTTGGGTCTTAAGGAAAGATGTGTGGCTGTTGACACTATATCACTTGTTGCTCGAATATTGAATAGATCCAAAGCTCATCTCCAATCAATGCTTTTGCAAAGTAATGCTACTGTACTTGAGGATTTCTATCAGCATCTGGTGGATGCCGTACCAGATCTTGCAGAGCATATTCATAGGACAACGGCAAGACAACTACTGCACATCAATGGGTATGTTGAACGTGTTGCCAATTGTAGATGGGAAGTAAAAGAGCTTGGGCTAGAGCATAATGGTTATGTGGATCTGTTGCTTGGAGAATTTAAGCACTATAAAACCCGTCTTGCTCATGGGGGAATTCGTCAAGAGATTCAAGACCTACTATTAGAATATGGGCTTGAAATTGTGGCGGAAACTCTTGTAGAAGGACTTTCACGGGTAAAGAGATGTAGTGACGAAGGGCGAGCTTTAATGTCATTGGATCTGCAGGTTTTAATCAATGGACTGCATCATTTTGTGTCCATGAATGTGAAACCCAAGCTACAAATGGTTGAAACCTTCATTAAGGCTTACTATCTTCCAGAGACAGAATTTGTGCACTGGGCCCGCGCACACCCGGAATACACTAAAAGTCAGATTATTGGGTTGATAAACCTTGTTGCTACGATGAAAGGTTGGAAGAGAAAAACCAGGTCGGAAGTCTTGGAAAAGATTGAGTGA	3321	0.417	MQPNLFPFGSFQGNPFIFNGDLSEGFESSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSMYGNRNHGQEVEELEDEFYEEDFDPVKYVLEHAPAEENELAHFEKQAALRLAQLDRVAECLSRHVMEHHQVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPVLTELQRALDMQSTLESLAEEGNYCKAFQVLSEFLQLIDSLSEFSAIQEMTRDVEVWLGKTLQKLDALLLGVCQEFKEDSYITVIDAYALIGDVTGLAEKIQSFYMQEVISETHSVLKAVVYEDEDAPSQNSRFTYSDLCLQISESKFRPCLLRTLVVLFELMHSYHEIMEFELDRQDTAGQTSNNDNDDVSCSPGGAGEVDADVRIRNVSGDEIHGSSSREESETASSLVETSNSTALPCTGSHDPVNEARQEDNATSSIESPWYHLRKEATEFVSQTLKRGRKNLWHLTTSRISVLLSSDAACTTSIHQFLKNYEDLNVFILAGEAFCGSEAVEFRQKVKVVCENYFIAFHRQNIHALKMVLDKEMWLKLPPDTLQMISFSGLVGDGAPLISLSNRKSVNLVHSHNSSRKSGFSYWLQNANPFLQKLSTPRETHCFPQSNGSTYGELDGNSNGNFYGDKVSPRKNDSSQMNGANSISDEENEDLLADFIDEDSQLPSRSSKPNHPRRKSLNCNDEENSAQTGSSLSLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFNFLYETFGHHNTDFHGKGSTDSLNYRLRAALSKITQDCDQWIKLLSSSPTSSFVHSEVTPAAPPSTNLGSSSVTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNATVLEDFYQHLVDAVPDLAEHIHRTTARQLLHINGYVERVANCRWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRQEIQDLLLEYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAYYLPETEFVHWARAHPEYTKSQIIGLINLVATMKGWKRKTRSEVLEKIE	1106

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele29g0312	1106	MobiDBLite	consensus disorder prediction	444	459	-	-
	Lele29g0312	1106	MobiDBLite	consensus disorder prediction	418	497	-	-
	Lele29g0312	1106	PANTHER	UNCHARACTERIZED	45	1106	IPR040047	GO:0032456\|GO:0042147\|GO:1990745
	Lele29g0312	1106	MobiDBLite	consensus disorder prediction	674	717	-	-
	Lele29g0312	1106	MobiDBLite	consensus disorder prediction	732	764	-	-
	Lele29g0312	1106	Pfam	Protein of unknown function C-terminus (DUF2451)	876	1106	IPR019514	-
	Lele29g0312	1106	MobiDBLite	consensus disorder prediction	460	481	-	-
	Lele29g0312	1106	Pfam	Vacuolar-sorting protein 54, of GARP complex	121	410	IPR019515	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele29g0312	Lele-ChrLele29	1863479	1875700	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele29g0312	29	1863479	1875700	Lele31g1236	31	18649086	18664753	hybridization
	Lele29g0312	29	1863479	1875700	Lele32g0293	32	1828891	1840434	hybridization