Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0292 ATGGAAAACCTCAGCGTCCTCGTTGTCCCTCTCCTGTTCTTTGCTCTCCTTCTTCATGGAGCAACTGTCACAGCTTTCGGAAACCGAGATGGATCAGAGGAATGGGGATATGTTCAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTTTACAAAAGTCCCTACAGAGTTGAAGATCCCTTCAAGCCATGGCCTATCGTTCTTTGGTTGCAGGGAGGACCTGGTGCTTCAGGAGTCGGGGTTGGGAATTTTCAGGAGATTGGACCTTTAGATACCAATTTGAAGCCGAGGAACTCCACATGGCTTCGAAAAGCAGATCTCTTATTTGTGGACAACCCAGTTGGGACAGGGTTCAGCTTTGTGGATGATAAAAAACTGTTCGTGAAAACAGACGAAGAAGCAGCCACTGACTTGACGACATTGTTGATTAAGATATTTAATCGAAAAGCGAGCCTCCAAAAGAGTCCTCTGTTCCTCGTAGCAGAGTCATATGGTGGAAAATATGCTGTCACTCTTGGCTTATCTATTCTTAAAGCTATTGAAGCTGGAAAATTGAAGCTCAAACTTGGAGGTGTGGCATTAGGGGACAGTTGGATCTCCCCTGAAGATTTTGTGTTCTCATGGGGCCCTCTTCTAAAAGACGTCTCAAGACTTGATGACAATGGGCTGCAAAAATCAAACAGATTAGCCCAGAAGATCAAGAAACAAATTAAGAACGGCCAATTTGCGGAAGCAACCAGATCATGGGGCGATCTTGAGAATGTCATTCTTGAAAACAGCAACAATGTGGACTTCTACAATTTTATGCAGGATGATAGCAGTTCTGCAACTTCATCGGCAATGTCGGAGATGGGGTCATACAGAGAAATAGCACTGAAACGATACTCCGATTATCTAACTTCAAAGAGGTCATCTTCTACTAGTGGTGGTGACCTAGAAAGCTTGTTAAATGGTGTCATCAAGAAAAAGTTAAAGACCATCCATGAAAATGTCAGATCAGCTTCACATGGCCGCTGTGATGACAGGTGGGGAGCACAGGCAAGGGAGGTTTTCATAAATCTTAAAGGCGATTTCATGAAACCAAGAATTAAGGAGGTTGATGAGTTGCTAGCAAAGGGAGTCAATGTGACTGTGTACAATGGACAAATTGATCTGATCTGTTCAACCATGGGAACTGAAGCTTGGCTTAAGAAACTCAAGTGGAAAGGGCTTAAAAGCTTCTTGAAGAAGAAGAGAACACCTCTCTACTGTAAAAATGAGCGAGGCACGACAGCTTTTGTGAAGTCATACAAAAACTTGAACTTTTATTGGATTCTTGGAGCTGGTCATTTTGTACCCACTGATCAGCCTTGTGCAGCATTAAACATGGTGGGTCGGATTACACAGTCGCCAGCAGCTTCTTAA 1404 0.438 MENLSVLVVPLLFFALLLHGATVTAFGNRDGSEEWGYVQVRPKAHMFWWLYKSPYRVEDPFKPWPIVLWLQGGPGASGVGVGNFQEIGPLDTNLKPRNSTWLRKADLLFVDNPVGTGFSFVDDKKLFVKTDEEAATDLTTLLIKIFNRKASLQKSPLFLVAESYGGKYAVTLGLSILKAIEAGKLKLKLGGVALGDSWISPEDFVFSWGPLLKDVSRLDDNGLQKSNRLAQKIKKQIKNGQFAEATRSWGDLENVILENSNNVDFYNFMQDDSSSATSSAMSEMGSYREIALKRYSDYLTSKRSSSTSGGDLESLLNGVIKKKLKTIHENVRSASHGRCDDRWGAQAREVFINLKGDFMKPRIKEVDELLAKGVNVTVYNGQIDLICSTMGTEAWLKKLKWKGLKSFLKKKRTPLYCKNERGTTAFVKSYKNLNFYWILGAGHFVPTDQPCAALNMVGRITQSPAAS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0292 467 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Lele32g0292 467 FunFam Carboxypeptidase 18 465 - -
Lele32g0292 467 Pfam Serine carboxypeptidase 31 461 IPR001563 GO:0004185|GO:0006508
Lele32g0292 467 SUPERFAMILY alpha/beta-Hydrolases 28 463 IPR029058 -
Lele32g0292 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Lele32g0292 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Lele32g0292 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Lele32g0292 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Lele32g0292 467 Gene3D alpha/beta hydrolase 19 466 IPR029058 -
Lele32g0292 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 450 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0292 Lele-ChrLele32 1823630 1826988 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0311 29 1858656 1861957 Lele32g0292 32 1823630 1826988 hybridization
Lele30g1100 30 14113734 14117090 Lele32g0292 32 1823630 1826988 hybridization