Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1100 ATGGAAAACCTCAGCGTCCTTGTTGCCCCTCTTCTGTTCTTTGTTCTCCTTCTTCAGGGAGGAACTGTCACAGCTTTTGGAAACCGAGATGGATCAGAGGAATGGGGATATGTTCAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTTTACAAAAGTCCCTACAGAGTTGAAGATCCCTTCAAGCCATGGCCTATCATTCTTTGGCTGCAGGGAGGACCTGGTGCTTCAGGAGTCGGGGTTGGGAATTTTCAGGAGATTGGGCCTTTAGATACCAATTTGAAGCCGAGGAACTCCACATGGCTTCGAAAAGCAGATCTCTTATTTGTGGACAACCCAGTTGGGACAGGGTTCAGCTTTGTGGATGATAAAAAGCTGTTCGTGAAAACAGATGAAGAAGCAGCCACTGACTTGACGACATTGTTGATTAAGATATTTAATCGAAAAGCGAGCCTCCAAAAGAGGCCTCTGTTCCTCTTAGCAGAGTCATATGGTGGAAAATATGCTGTCACTCTTGGCTTATCTATTCTTAAAGCTATTGAATCTGGAAAATTGAAGCTCAAACTTGGAGGTGTGGCATTAGGGGACAGTTGGATCTCCCCTGAAGATTTTGTGTTGTCATGGGCCCCTCTTCTAAAGGACGTCTCAAGACTTGATGACAATGGGCTGCAAAAATCAAACAGATTAGCCCAGAAGATCAAGCAACAAATTAAGAACGGCCAATTTGCGGAAGCAACCAGATCATGGGGCGATCTTGAGAATGTCATTCTTGAAAACAGCAACAATGTGGACTTCTACAATTTTATGCAGGATGATAGCAGTTCTGCAACTTCATCGGCAATGTCGGAGATGGGATCATACAGAGAAATAGCACTGAAACGATACTCCAATTATCTAACTTCAAAGAGGTCATCTTCTACTAGTGGTGGTGACCTAAAAAGCTTGTTAAATGGTGTCATCAAGAAAAAGTTAAAGACCATCCCTGAAAATGTCAGGTGGGGAGCACAGGCCAGGGAGGTTTTCATAAATCTTAAAGGCGATTTCATGAAACCAAGAATTAAGGAGGTTGATGAGTTGCTAGCCAAGGGAGTCAATGTGACTGTGTACAATGGACAAATTGATCTGATCTGTGCAACCATGGGAACTGAAGCTTGGCTTAAGAAACTCGAGTGGAAAGGGCTTAAAAGCTTCTTGAAGAAGGAGAGAACACCTCTCTACTGTAAAAATGAGCGAGGCACGAAAGCTTTTGTGAAGTCACACAAAAACCTGAACTTTTATTGGATTCTTGGAGCTGGTCATTTTGTACCCACTGATCAGCCTTGTGCAGCATTAAACATGGTGGGTCGAATTACACAGTCGCCAGCAACTTCTTAA 1374 0.4374 MENLSVLVAPLLFFVLLLQGGTVTAFGNRDGSEEWGYVQVRPKAHMFWWLYKSPYRVEDPFKPWPIILWLQGGPGASGVGVGNFQEIGPLDTNLKPRNSTWLRKADLLFVDNPVGTGFSFVDDKKLFVKTDEEAATDLTTLLIKIFNRKASLQKRPLFLLAESYGGKYAVTLGLSILKAIESGKLKLKLGGVALGDSWISPEDFVLSWAPLLKDVSRLDDNGLQKSNRLAQKIKQQIKNGQFAEATRSWGDLENVILENSNNVDFYNFMQDDSSSATSSAMSEMGSYREIALKRYSNYLTSKRSSSTSGGDLKSLLNGVIKKKLKTIPENVRWGAQAREVFINLKGDFMKPRIKEVDELLAKGVNVTVYNGQIDLICATMGTEAWLKKLEWKGLKSFLKKERTPLYCKNERGTKAFVKSHKNLNFYWILGAGHFVPTDQPCAALNMVGRITQSPATS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1100 457 FunFam Carboxypeptidase 18 455 - -
Lele30g1100 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Lele30g1100 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Lele30g1100 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Lele30g1100 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Lele30g1100 457 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Lele30g1100 457 SUPERFAMILY alpha/beta-Hydrolases 30 453 IPR029058 -
Lele30g1100 457 Pfam Serine carboxypeptidase 31 451 IPR001563 GO:0004185|GO:0006508
Lele30g1100 457 Gene3D alpha/beta hydrolase 22 456 IPR029058 -
Lele30g1100 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 440 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1100 Lele-ChrLele30 14113734 14117090 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1100 30 14113734 14117090 Lele31g1237 31 18666288 18669591 hybridization
Lele30g1100 30 14113734 14117090 Lele32g0292 32 1823630 1826988 hybridization