Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0311 ATGGATCAAATGAAAATCCTCAGCGTCCTTGTCGTCCCTCTTCTGTTCTTTGGTCTCCTCCTTCAGGGAGGAAATGTCACAGCTTTTGGAAACCGAGATGGATCAGAGGAATGGGGATATGTTCAAGTCCGACCCAAAGCCCACATGTTCTGGTGGCTTTACAAAAGTCCCTACAGAGTTGAAGATCCCTCCAAGCCATGGCCTATTATTCTTTGGTTGCAGGGAGGACCTGGTGCTTCAGGAGTCGGGCTTGGGAATTTTGAGGAGGTTGGACCTTTAGATACCAATTTGAAGCCGAGGAACTCCACTTGGCTTCGAAAAGCGGATCTCTTATTTGTGGACAACCCAGTTGGGACAGGGTTCAGCTTTGTGGAAGATAAAAACCTGTTCGTGAAAACAGACGAAGAAGCAGCCACTGACTTGACGAAATTGTTGATTAGCATATTTAATCGAAAAGCGAGCCTCCAAAAGAGTCCCCTGTTCCTCGTAGCAGAGTCATATGGTGGAAAATATGCTGTCACTCTTGGCTTATCTATTCTTAAAGCTATTGAAGCTGGAAAATTGAAGCTCAAACTTGGAGGTGTGGCATTAGGGGACAGTTGGATCTCCCCTGAAGATTTTGTGTTTTCATGGGGCCCTCTTCTAAAAGCCGTCTCAAGACTTGATGACAACGGCCTGCAAAAATCAAACAGATTAGCCCAGAAGATCAAGCAACAAATTAAGAAGGGCCAATTTGCCGAAGCAACCAGATCATGGGGCAAGCTTGAGGAACTCATTCTTGCAAACAGCAACAATGTGGACTTCTACAATTTTCTGCAGGATGCTAGCAATTCTCCAACTTCGTCAGCAGCGTTGGAGATGGGGTCATACAGAGAAACAGCACTGAAACGATACTCCAATTACCTAACTTCAAAGAAGTCATCTGCTACTACTAGTGGTGGTGACCTAAAAAGCTTGTTAAATGGTGTCATCAAGAAAAAGTTAAAAATCATCCCTAAAAATGTCACCTCACATGGCTACTGTGATGATGACAGATGGAGAGCACAGGGCAGTGAGGTTTTCGCAAATCTTCGAGGCGATTTCATGAAACCAAGAATTAAGGAGGTTGATGAGTTGCTAGCAAAGGGAGTCAATGTGACTGTGTACAATGGACAAATTGATCTGATTTGTGCAACCATGGGAACTGAAGCTTGGCTTAAGAAGCTCAAGTGGAAAGGGCTTAAGAGCTTCTTGAAGAAGGAGAGAAAACCTCTCTACTGTAAAAATAAGAAAGGCACGAAAGGCTTTGTGAAGTCATACAAAAACCTTCACTTTTATTGGATTCTTGGAGCTGGTCATTTTGTACCTTCAGACCAGCCTTGTGCAGCATTAAACATGGTGGGTGGGATTACACAGTCACCAGCAACTGCTTAA 1413 0.4409 MDQMKILSVLVVPLLFFGLLLQGGNVTAFGNRDGSEEWGYVQVRPKAHMFWWLYKSPYRVEDPSKPWPIILWLQGGPGASGVGLGNFEEVGPLDTNLKPRNSTWLRKADLLFVDNPVGTGFSFVEDKNLFVKTDEEAATDLTKLLISIFNRKASLQKSPLFLVAESYGGKYAVTLGLSILKAIEAGKLKLKLGGVALGDSWISPEDFVFSWGPLLKAVSRLDDNGLQKSNRLAQKIKQQIKKGQFAEATRSWGKLEELILANSNNVDFYNFLQDASNSPTSSAALEMGSYRETALKRYSNYLTSKKSSATTSGGDLKSLLNGVIKKKLKIIPKNVTSHGYCDDDRWRAQGSEVFANLRGDFMKPRIKEVDELLAKGVNVTVYNGQIDLICATMGTEAWLKKLKWKGLKSFLKKERKPLYCKNKKGTKGFVKSYKNLHFYWILGAGHFVPSDQPCAALNMVGGITQSPATA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0311 470 SUPERFAMILY alpha/beta-Hydrolases 33 466 IPR029058 -
Lele29g0311 470 FunFam Carboxypeptidase 21 468 - -
Lele29g0311 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 453 IPR001563 GO:0004185|GO:0006508
Lele29g0311 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 123 IPR001563 GO:0004185|GO:0006508
Lele29g0311 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 173 IPR001563 GO:0004185|GO:0006508
Lele29g0311 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 100 112 IPR001563 GO:0004185|GO:0006508
Lele29g0311 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Lele29g0311 470 ProSitePatterns Serine carboxypeptidases, serine active site. 162 169 IPR018202 GO:0004185
Lele29g0311 470 Pfam Serine carboxypeptidase 34 461 IPR001563 GO:0004185|GO:0006508
Lele29g0311 470 Gene3D alpha/beta hydrolase 25 468 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0311 Lele-ChrLele29 1858656 1861957 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0311 29 1858656 1861957 Lele31g1237 31 18666288 18669591 hybridization
Lele29g0311 29 1858656 1861957 Lele32g0292 32 1823630 1826988 hybridization